DRSC/TRiP Functional Genomics Resources

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Protein Alignment jim and Zfp467

DIOPT Version :10

Sequence 1:NP_001262221.1 Gene:jim / 43924 FlyBaseID:FBgn0027339 Length:938 Species:Drosophila melanogaster
Sequence 2:NP_001019498.1 Gene:Zfp467 / 500110 RGDID:1561603 Length:594 Species:Rattus norvegicus


Alignment Length:648 Identity:160/648 - (24%)
Similarity:231/648 - (35%) Gaps:218/648 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   124 QQQVSPSSSPYPSVQQQQRANGAGDEDPMNHQLANQQNPAPNQNQSSNDPQHSGSNAGESGNPHV 188
            |.:::|.|.|.......|....:.||..: |..:..:.|                  |:....|.
  Rat    17 QPEMAPQSEPRDGFSNPQEKMSSRDESTL-HSCSGPETP------------------GQKEGIHT 62

  Fly   189 QQNGGPQNDPGNSFRTPDYYDPRHAAPQGGMLAPPGFPPLHYLNKGVLPMEQSGGGGGAGGGEAY 253
            :|...|  ..|:....|...:|..:.|                                  ||.:
  Rat    63 EQAEAP--CMGSQACIPQKAEPASSVP----------------------------------GEEW 91

  Fly   254 A-------------------------LPEMLPAQQNGQQNAGPANTNANEGGAGANGSGGVGGAT 293
            .                         ||...|....||.                        |.
  Rat    92 MIRKVKVEDEDQEAEEEVEWPQHLSFLPSPFPTPDLGQL------------------------AV 132

  Fly   294 GASVGVGSVGVTSGGRTGNG----PGRPH-------KNKPHSDLRLFK----------CLTCGKD 337
            ...:..|:.| |.||...:|    |.:|:       :.:....|||.:          |..||:.
  Rat   133 AYKLEPGTPG-TLGGIALSGWAPIPEKPYGCEECERRFRDQLTLRLHQRLHRGEGPCACPDCGRS 196

  Fly   338 FKQKSTLLQHDRIHTDARPFPCSECGKRFRQQSHLTQHLRIHANEKPFTCPYCSRSFRQRAILNQ 402
            |.|::.:|.|.|.|...||||||||.|||.:::|||:|||.|..|:|:.|..|.:.|.|:..|..
  Rat   197 FTQRAHMLLHQRSHRGERPFPCSECDKRFSKKAHLTRHLRTHTGERPYPCAECGKRFSQKIHLGS 261

  Fly   403 HIRIHSGEKPFACPECGKHFRQKAILNQHVRTHQDVSP--------------HLI---------- 443
            |.:.|:||:||.|.||.|.||:|..|.:|.|.|....|              ||:          
  Rat   262 HQKTHTGERPFPCTECEKRFRKKTHLIRHQRIHTGERPYQCTQCTRSFTHKQHLVRHQRVHDAAS 326

  Fly   444 -------FKNGPHP---TLWPSDV---PFP----GEDNDTKGDIAGTGGGYH---------DEDS 482
                   ....|||   :|.||..   ||.    |:....|.::| |....|         ||.:
  Rat   327 RTRSSPDIPATPHPPTASLAPSPTGPKPFACSHCGQSFGWKKNLA-THQSLHLTEGRPFGCDECA 390

  Fly   483 QGT---------------PD---GSGGMHYPSYFKDGKGQKILPEVLQHIGVRPANMPLYVRCPI 529
            .||               ||   |||              .:.|:       |..:......||.
  Rat   391 LGTNVDPAAEPSACTPHAPDCGPGSG--------------PVAPQ-------RTTSSERSFFCPD 434

  Fly   530 CDKEFKQKTTLLQHGCIHIESRPYPCPECGKRFRQQSHLTQHLRIHTNEKPFGCMYCPRFFRQRT 594
            |.:.|.....|.:|..:|...||:.|.:||:||..:.:|..|.|.|:..:||.|..|.|.|.:::
  Rat   435 CGRGFAHGQHLARHRRVHTGERPFACAQCGRRFGSRPNLVAHSRAHSGARPFACAQCGRRFSRKS 499

  Fly   595 ILNQHLRIHTGEKPYKCGQCGKDFRQKAILDQHTRTHQGDRPFCCPMPNCRRRFATENEVTKH 657
            .|.:|..:|||.:|:.|..|.:.|..|..|.:|...|.|.|||.|  |.|.:.|:.:..:.:|
  Rat   500 HLGRHQAVHTGSRPHACAVCARCFSSKTNLVRHQAIHTGSRPFSC--PQCAKSFSRKTHLVRH 560

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
jimNP_001262221.1 C2H2 Zn finger 331..351 CDD:275368 8/19 (42%)
COG5048 355..666 CDD:227381 115/371 (31%)
C2H2 Zn finger 359..379 CDD:275368 13/19 (68%)
C2H2 Zn finger 387..407 CDD:275368 6/19 (32%)
C2H2 Zn finger 415..435 CDD:275368 10/19 (53%)
C2H2 Zn finger 527..547 CDD:275368 6/19 (32%)
C2H2 Zn finger 555..575 CDD:275368 8/19 (42%)
C2H2 Zn finger 583..603 CDD:275368 6/19 (32%)
C2H2 Zn finger 611..631 CDD:275368 6/19 (32%)
C2H2 Zn finger 639..661 CDD:275368 5/19 (26%)
Zfp467NP_001019498.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..70 13/73 (18%)
C2H2 Zn finger 162..182 CDD:275368 3/19 (16%)
COG5048 190..564 CDD:227381 124/395 (31%)
C2H2 Zn finger 190..210 CDD:275368 8/19 (42%)
C2H2 Zn finger 218..238 CDD:275368 13/19 (68%)
C2H2 Zn finger 246..266 CDD:275368 6/19 (32%)
C2H2 Zn finger 274..294 CDD:275368 10/19 (53%)
C2H2 Zn finger 302..322 CDD:275368 2/19 (11%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 313..350 8/36 (22%)
C2H2 Zn finger 357..377 CDD:275368 4/20 (20%)
C2H2 Zn finger 432..452 CDD:275368 6/19 (32%)
C2H2 Zn finger 460..480 CDD:275368 8/19 (42%)
C2H2 Zn finger 488..508 CDD:275368 6/19 (32%)
C2H2 Zn finger 516..536 CDD:275368 6/19 (32%)
C2H2 Zn finger 544..564 CDD:275368 5/19 (26%)

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