DRSC/TRiP Functional Genomics Resources

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Protein Alignment jim and ZNF530

DIOPT Version :9

Sequence 1:NP_001262221.1 Gene:jim / 43924 FlyBaseID:FBgn0027339 Length:938 Species:Drosophila melanogaster
Sequence 2:NP_065931.3 Gene:ZNF530 / 348327 HGNCID:29297 Length:599 Species:Homo sapiens


Alignment Length:379 Identity:125/379 - (32%)
Similarity:175/379 - (46%) Gaps:49/379 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   316 RPHK-----------------NKPHSDLRLFKCLTCGKDFKQKSTLLQHDRIHTDARPFPCSECG 363
            ||:|                 .|.|...|..:|..|||.|.:|:.|.||.|:||..||:.|||||
Human   237 RPYKCSECGKSFSQSSGFLRHRKAHGRTRTHECSECGKSFSRKTHLTQHQRVHTGERPYDCSECG 301

  Fly   364 KRFRQQSHLTQHLRIHANEKPFTCPYCSRSFRQRAILNQHIRIHSGEKPFACPECGKHFRQKAIL 428
            |.|||.|.|.||.|:|..|:|:.|..|.:||.....|.:|...|:..:|:.|.||||.|.....|
Human   302 KSFRQVSVLIQHQRVHTGERPYECSECGKSFSHSTNLYRHRSAHTSTRPYECSECGKSFSHSTNL 366

  Fly   429 NQHVRTHQDVSPHLIFKNGP----------HPTLWPSDVPFPGEDNDTKGDIAGTGGGYHDEDSQ 483
            .:|.|.|..|.|:...:.|.          |......:.|:...:       .|...|......|
Human   367 FRHWRVHTGVRPYECSECGKAFSCNIYLIHHQRFHTGERPYVCSE-------CGKSFGQKSVLIQ 424

  Fly   484 GTPDGSGGMHYP-----SYFKDGKGQKILPEVLQHIGVRPANMPLYVRCPICDKEFKQKTTLLQH 543
            .....:|...|.     ..|....|      :.:|........|  ..|..|:|.|..||.|::|
Human   425 HQRVHTGERPYECSECGKVFSQSSG------LFRHRRAHTKTKP--YECSECEKSFSCKTDLIRH 481

  Fly   544 GCIHIESRPYPCPECGKRFRQQSHLTQHLRIHTNEKPFGCMYCPRFFRQRTILNQHLRIHTGEKP 608
            ..:|...|||.|..|||.|.:::||.:|..:||||:|:.|..|.:.:.|.:.|.||.|:||||:|
Human   482 QTVHTGERPYECSVCGKSFIRKTHLIRHQTVHTNERPYECDECGKSYSQSSALLQHRRVHTGERP 546

  Fly   609 YKCGQCGKDFRQKAILDQHTRTHQGDRPFCCPMPNCRRRFATENEVTKHIDNHM 662
            |:|.:|||.|.:|..|.||...|.|:||:.|  ..|.:.|:..:.:.:|...|:
Human   547 YECRECGKSFTRKNHLIQHKTVHTGERPYEC--SECGKSFSQSSGLLRHRRVHV 598

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
jimNP_001262221.1 C2H2 Zn finger 331..351 CDD:275368 10/19 (53%)
COG5048 355..666 CDD:227381 107/323 (33%)
zf-C2H2 357..379 CDD:278523 14/21 (67%)
C2H2 Zn finger 359..379 CDD:275368 14/19 (74%)
zf-H2C2_2 371..396 CDD:290200 11/24 (46%)
C2H2 Zn finger 387..407 CDD:275368 6/19 (32%)
zf-H2C2_2 400..424 CDD:290200 10/23 (43%)
C2H2 Zn finger 415..435 CDD:275368 9/19 (47%)
C2H2 Zn finger 527..547 CDD:275368 8/19 (42%)
zf-C2H2 553..575 CDD:278523 9/21 (43%)
C2H2 Zn finger 555..575 CDD:275368 8/19 (42%)
C2H2 Zn finger 583..603 CDD:275368 7/19 (37%)
zf-H2C2_2 596..620 CDD:290200 15/23 (65%)
C2H2 Zn finger 611..631 CDD:275368 9/19 (47%)
zf-H2C2_2 624..650 CDD:290200 10/25 (40%)
C2H2 Zn finger 639..661 CDD:275368 4/21 (19%)
ZNF530NP_065931.3 KRAB 14..>55 CDD:214630
KRAB 14..53 CDD:279668
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 68..88
C2H2 Zn finger 213..233 CDD:275368
C2H2 Zn finger 241..261 CDD:275368 1/19 (5%)
COG5048 264..598 CDD:227381 119/350 (34%)
zf-C2H2 267..289 CDD:278523 10/21 (48%)
C2H2 Zn finger 269..289 CDD:275368 10/19 (53%)
zf-H2C2_2 281..306 CDD:290200 15/24 (63%)
C2H2 Zn finger 297..317 CDD:275368 14/19 (74%)
zf-H2C2_2 310..334 CDD:290200 11/23 (48%)
C2H2 Zn finger 325..345 CDD:275368 6/19 (32%)
zf-C2H2 351..373 CDD:278523 9/21 (43%)
C2H2 Zn finger 353..373 CDD:275368 9/19 (47%)
C2H2 Zn finger 381..401 CDD:275368 2/19 (11%)
zf-H2C2_2 397..416 CDD:290200 3/25 (12%)
C2H2 Zn finger 409..429 CDD:275368 3/26 (12%)
zf-H2C2_2 422..446 CDD:290200 4/23 (17%)
C2H2 Zn finger 437..457 CDD:275368 3/25 (12%)
C2H2 Zn finger 465..485 CDD:275368 8/19 (42%)
zf-H2C2_2 477..502 CDD:290200 11/24 (46%)
C2H2 Zn finger 493..513 CDD:275368 8/19 (42%)
zf-H2C2_2 505..530 CDD:290200 10/24 (42%)
C2H2 Zn finger 521..541 CDD:275368 7/19 (37%)
zf-H2C2_2 533..558 CDD:290200 15/24 (63%)
C2H2 Zn finger 549..569 CDD:275368 9/19 (47%)
zf-H2C2_2 561..586 CDD:290200 10/26 (38%)
C2H2 Zn finger 577..597 CDD:275368 4/21 (19%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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