Protein Alignment jim and crol

DIOPT Version :10

• Sequence 1: NP_001262221.1
• Gene: jim / 43924
• FlyBaseID: FBgn0027339
• Length: 938
• Species: Drosophila melanogaster
• Sequence 2: NP_477243.1
• Gene: crol / 34592
• FlyBaseID: FBgn0020309
• Length: 962
• Species: Drosophila melanogaster
• Alignment Length: 919
• Identity: 226/919 - (24%)
• Similarity: 317/919 - (34%)
• Gaps: 257/919 - (27%)

  Fly   206 DYYDPRHAAPQGGMLAPPGFPPL------HYL------------NKGVLPMEQSGGGGGAGGGEA 252
            |..:.:.||..||.|.||  |||      |..            |..|..:..|.....|....|
  Fly    74 DVVNHQLAAAHGGQLPPP--PPLPPQVTSHAASAAAAAAAASTNNAAVAAVMASANAAAAAAAAA 136

  Fly   253 YALPEMLPAQQ-NGQQNAGPANTNANEGGAGANGSGGVGGATG----ASVGVGSVGVTSGGRTGN 312
            .|...:.||.. ||.|......|:::....|:..|||.....|    ..:..|..||...|..||
  Fly   137 SAGGGLPPATSGNGGQQVTVTTTSSSTSSGGSTTSGGTTTTAGELLMPKMEGGIHGVDGSGNGGN 201

  Fly   313 GPGRPHKNKP-------------------------------HSDLRLFKCLTCGKDFKQKSTLLQ 346
            |.|:.....|                               ||:.:.|.|..||:.|.....|.:
  Fly   202 GGGQNVALAPDGTPIATGTHVCDICGKMFQFRYQLIVHRRYHSERKPFMCQVCGQGFTTSQDLTR 266

  Fly   347 HDRIHTDARPFPCSECGKRFRQQSHLTQHLRIHANEKPFTCPYCSRSFRQRAILNQHIRIHSGEK 411
            |.:||.....|.|..|...|...:.|.:|::.|:.:|||.|..|.::|.::..|:.|.|.|:||.
  Fly   267 HGKIHIGGPMFTCIVCFNVFANNTSLERHMKRHSTDKPFACTICQKTFARKEHLDNHFRSHTGET 331

  Fly   412 PFACPECGKHFRQKAILNQHVRTHQDVSPHLI------FKNGPHPT---LW-----PSDVPFPGE 462
            ||.|..|.|.|.:|..:..|||.|...:||..      |....|..   :|     |......|:
  Fly   332 PFRCQYCAKTFTRKEHMVNHVRKHTGETPHRCDICKKSFTRKEHYVNHYMWHTGQTPHQCDVCGK 396

  Fly   463 DNDTKGDIAGTGGGYHDEDSQGTP--------DGSGGMHYPSYFKDGKGQKILPEVLQHIGVRPA 519
            ....|..:|.....:.:|    ||        ..|...|:.::            :|.|.|..|.
  Fly   397 KYTRKEHLANHMRSHTNE----TPFRCEICGKSFSRKEHFTNH------------ILWHTGETPH 445

  Fly   520 NMPLYVRCPICDKEFKQKTTLLQHGCIHIESRPYPCPECGKRFRQQSHLTQHLRIHTNEKPFGCM 584
                  ||..|.|.|.:|..||.|...|....|:.|..|.|.|.::.||..|:|.||.|.||.|.
  Fly   446 ------RCDFCSKTFTRKEHLLNHVRQHTGESPHRCSYCMKTFTRKEHLVNHIRQHTGETPFKCT 504

  Fly   585 YCPRFFRQRTILNQHLRIHTGEKPYKCGQCGKDFRQKAILDQHTRTHQGDRPFCCPMPNCRRRFA 649
            ||.:.|.::..:..|:|.||||.|:||..|.|.|.:|..|..|.|.|.||.|..|..  |::.|.
  Fly   505 YCTKAFTRKDHMVNHVRQHTGESPHKCTYCTKTFTRKEHLTNHVRQHTGDSPHRCSY--CKKTFT 567

  Fly   650 TENEVT------------------------KHIDNHM------NPNTTKV------RRQ------ 672
            .:..:|                        :|::|||      ||:...|      |::
  Fly   568 RKEHLTNHVRLHTGDSPHKCEYCQKTFTRKEHLNNHMRQHSSDNPHCCNVCNKPFTRKEHLINHM 632

  Fly   673 ---------------------------QQQQHQQQQQQQQQQQQQQQQQNNNAVAQVANHLMN-- 708
                                       .|:.|.:.|:.::....::..:|......:.:|:.:
  Fly   633 SRCHTGDRPFTCETCGKSFPLKGNLLFHQRSHTKGQEMERPFACEKCPKNFICKGHLVSHMRSHS 697

  Fly   709 ----DAKSLAAQQFLNN---------NNPSAVDNKANILPVRSIASNAAAAAVVQQSVVKNE--- 757
                .|.:|.::.|:..         |:|.|:.....:.|...|     .|.|:.|  ||.|
  Fly   698 GEKPHACTLCSKAFVERGNLKRHMKMNHPDAMMPPPPVHPHPQI-----PAGVLTQ--VKQEVKP 755

  Fly   758 LYFPQCYGPPFQHPFQAQQQQAQQPSVAHANG--------GPTPPVTVTVA--NSVASGVVVQQN 812
            :..|       .|.........||.:...|.|        |..|.||.|:.  |:.|.....:|.
  Fly   756 IIIP-------HHSATTTMHTIQQITAGAAGGAGAVQLTPGLVPLVTSTLISHNAAAQQQSQKQQ 813

  Fly   813 ASASVVAQXHPTTAATGAQ---QQQPSAPQQQHHPPPPPPTSTAHHIASAAAAVTAVTPSSAHAS 874
            |:|:..||.....||...|   |||.:|..|||.     ....|.|...||.|        ||..
  Fly   814 AAAAAAAQQQAAAAAAAQQQAAQQQAAAAHQQHQ-----QQVAAQHQQQAAVA--------AHQQ 865

  Fly   875 PVAAPQTVTLSITLPPPPASHTVHPGHPGH---------------------PGHPGVANGAAPPP 918
            .....|.....:.|....|:|  |.....|                     .|||     .||||
  Fly   866 QQQQLQQQQQLLQLSIQQAAH--HHQQEQHRQQQQQQHQQQQQQQHHQQQQQGHP-----QAPPP 923

  Fly   919 PTLSHAIPI 927
            .......||
  Fly   924 QQQQQPPPI 932

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
jim	NP_001262221.1	C2H2 Zn finger	331..351	CDD:275368	6/19 (32%)
		COG5048	355..666	CDD:227381	106/362 (29%)
		C2H2 Zn finger	359..379	CDD:275368	5/19 (26%)
		C2H2 Zn finger	387..407	CDD:275368	6/19 (32%)
		C2H2 Zn finger	415..435	CDD:275368	8/19 (42%)
		C2H2 Zn finger	527..547	CDD:275368	8/19 (42%)
		C2H2 Zn finger	555..575	CDD:275368	8/19 (42%)
		C2H2 Zn finger	583..603	CDD:275368	6/19 (32%)
		C2H2 Zn finger	611..631	CDD:275368	8/19 (42%)
		C2H2 Zn finger	639..661	CDD:275368	5/45 (11%)
crol	NP_477243.1	C2H2 Zn finger	223..243	CDD:275368	0/19 (0%)
		C2H2 Zn finger	251..271	CDD:275368	6/19 (32%)
		C2H2 Zn finger	279..299	CDD:275368	5/19 (26%)
		COG5048	300..723	CDD:227381	109/446 (24%)
		C2H2 Zn finger	307..327	CDD:275368	6/19 (32%)
		C2H2 Zn finger	335..355	CDD:275368	8/19 (42%)
		C2H2 Zn finger	363..383	CDD:275368	2/19 (11%)
		C2H2 Zn finger	391..411	CDD:275368	3/19 (16%)
		C2H2 Zn finger	419..439	CDD:275368	3/31 (10%)
		C2H2 Zn finger	447..467	CDD:275368	8/19 (42%)
		C2H2 Zn finger	475..495	CDD:275368	8/19 (42%)
		C2H2 Zn finger	503..523	CDD:275368	6/19 (32%)
		C2H2 Zn finger	531..551	CDD:275368	8/19 (42%)
		C2H2 Zn finger	559..579	CDD:275368	4/21 (19%)
		C2H2 Zn finger	587..607	CDD:275368	4/19 (21%)
		C2H2 Zn finger	615..636	CDD:275368	2/20 (10%)
		C2H2 Zn finger	644..664	CDD:275368	1/19 (5%)
		C2H2 Zn finger	676..696	CDD:275368	2/19 (11%)
		C2H2 Zn finger	704..722	CDD:275368	2/17 (12%)