DRSC/TRiP Functional Genomics Resources

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Protein Alignment jim and Zbtb11

DIOPT Version :9

Sequence 1:NP_001262221.1 Gene:jim / 43924 FlyBaseID:FBgn0027339 Length:938 Species:Drosophila melanogaster
Sequence 2:XP_038944302.1 Gene:Zbtb11 / 304010 RGDID:1308275 Length:1092 Species:Rattus norvegicus


Alignment Length:822 Identity:176/822 - (21%)
Similarity:282/822 - (34%) Gaps:254/822 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 SQDAERNPGAIGATPAQWGSEMYPNIQQQAQQHLTA------------------QQQQQQQQQNA 87
            :||...:.||  |||        |..:.:|...|::                  :|..:..||.|
  Rat   330 TQDLAAHNGA--ATP--------PGPRNEATTTLSSDLGHCEIVLLVNGEVPETEQNGEPGQQPA 384

  Fly    88 AQAAAQAAAVAAAAGQPQSPP-------------------------GG----------------G 111
            .|.:|:|.|..:.||...:||                         ||                .
  Rat   385 PQVSAEAEASVSPAGCIPNPPTEMGAASLATESNQPELESAVVREDGGVASVPPKISEENVINTS 449

  Fly   112 QEARDNGS------------GDGRQQQVSPSSSPYPSVQQQQRANGAGDEDPMNHQLANQQNPAP 164
            ||..|.|:            .|..|....|.......::..::.:...|:|....:|..:     
  Rat   450 QEDSDIGNDTSPEDTCTKDFSDHSQSSGQPLKDEETLIEATEKTDSGQDDDTYRSRLRQR----- 509

  Fly   165 NQNQSSNDPQHSG------------SNAGESGNPHVQQNGGPQNDPGNSFRTPDYYDPRHAAPQG 217
            :.|:......|.|            .:|.:.....:.|.|.....|....:......| |...:.
  Rat   510 SVNEGGYIRLHKGMEKKLQKRKAISKSAVQQVAQKLVQRGKKMKQPKRDAKESAEETP-HKCGEC 573

  Fly   218 GMLAPPGFPPLHYLNKGVLPMEQSGGGGGAGGGEAYALP--------------EMLPAQQNGQQN 268
            ||:    ||..:......|..|::         ..|..|              .::...:.....
  Rat   574 GMV----FPRRYAFIMHTLKHERA---------RDYKCPLCKKQFQYSASLRAHLIRHTRKDAPT 625

  Fly   269 AGPANTNANEGGAGANGSGGVGGATGASVGVGSVGVTSGGRTGNGPGRPHKNKPHSDLRLFKCLT 333
            :..:|:.:||             |:|||        :..|||               .|.|.|..
  Rat   626 SSSSNSTSNE-------------ASGAS--------SEKGRT---------------KREFICSI 654

  Fly   334 CGKDFKQKSTLLQHDRIHTDARPFPCSECGKRFRQQSHLTQHLRIHANEKPFTCPYCSRSFRQRA 398
            ||:...:..:|..|...||..:|..|..|||.|..:..|..|..:|.::|.|.|..|.:||..:.
  Rat   655 CGRTLPKLYSLRIHMLKHTGVKPHACQVCGKTFIYKHGLKLHQSLHQSQKQFQCELCVKSFVTKR 719

  Fly   399 ILNQHIRIHSGEKPFACPECGKHFRQKAILNQHVRTHQDVSPHLIFKNGPHPT------LWP--- 454
            .|.:|:.||:||..:.|..|||.|.:.:.|::|::.||. .|.:   .|.|.|      :|.   
  Rat   720 SLQEHMSIHTGESKYFCSVCGKSFHRGSGLSKHLKKHQP-KPEV---RGYHCTQLHMDQVWQCFQ 780

  Fly   455 ---------SDVPFPGEDNDTKGDIAGTGGGYHDEDSQGTPDGSGGMHYP--------SYFKDGK 502
                     |.| |||  :..|..:                       :|        |:|   :
  Rat   781 LLILSASKLSRV-FPG--SSCKSPV-----------------------FPSDWIQCEKSFF---E 816

  Fly   503 GQKILPEVLQHIGVRPANMPLYVRCPICDKEFKQKTTLLQHGCIHIESRPYPCPECGKRFRQQSH 567
            .:.:...:.:|:||:|      .:|..|||.:..|.....|...|..:.||.|..|||.|.:::.
  Rat   817 ARDLRQHMNKHLGVKP------FQCQFCDKCYSWKKDWYSHVKSHSVTEPYRCNICGKEFYEKAL 875

  Fly   568 LTQHLRIHTNEKPFG---------CMYCPRFFRQRTILNQHLRIHTGEKPYKCGQCGKDFRQKAI 623
            ..:|::..|:.|. |         |..|.|.|.|.....:|:..|.|.||::|..||..:.....
  Rat   876 FRRHVKKATHGKK-GRAKQNLERVCDQCGRKFTQLREYRRHMNNHEGVKPFECLTCGVAWADARS 939

  Fly   624 LDQHTRTHQGDRPFCCPMPNCRRRFATENEVTKHIDN-HMN--PNTTKVRRQQQQQHQQQQQ--- 682
            |.:|.|||.|:||:.||:  |...:.....:.||:.. |.:  |....:.:...|.|.|..|   
  Rat   940 LKRHVRTHTGERPYVCPV--CSEAYIDARTLRKHMTKFHRDYVPCKIMLEKDTLQFHNQGTQVEH 1002

  Fly   683 -------QQQQQQQQQQQQNNNAVAQVANHLMNDAKSLAAQQ 717
                   ..|:|:....|:....|  |....|...:::||.:
  Rat  1003 AVSILTADMQEQESSGPQELETVV--VTGETMEVLEAVAATE 1042

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
jimNP_001262221.1 C2H2 Zn finger 331..351 CDD:275368 5/19 (26%)
COG5048 355..666 CDD:227381 94/348 (27%)
zf-C2H2 357..379 CDD:278523 7/21 (33%)
C2H2 Zn finger 359..379 CDD:275368 7/19 (37%)
zf-H2C2_2 371..396 CDD:290200 9/24 (38%)
C2H2 Zn finger 387..407 CDD:275368 6/19 (32%)
zf-H2C2_2 400..424 CDD:290200 11/23 (48%)
C2H2 Zn finger 415..435 CDD:275368 7/19 (37%)
C2H2 Zn finger 527..547 CDD:275368 6/19 (32%)
zf-C2H2 553..575 CDD:278523 7/21 (33%)
C2H2 Zn finger 555..575 CDD:275368 6/19 (32%)
C2H2 Zn finger 583..603 CDD:275368 6/19 (32%)
zf-H2C2_2 596..620 CDD:290200 8/23 (35%)
C2H2 Zn finger 611..631 CDD:275368 6/19 (32%)
zf-H2C2_2 624..650 CDD:290200 11/25 (44%)
C2H2 Zn finger 639..661 CDD:275368 5/22 (23%)
Zbtb11XP_038944302.1 Integrase_H2C2 68..120 CDD:407771
BTB_POZ_ZBTB11 195..312 CDD:349511
PRK12387 <556..621 CDD:183492 10/78 (13%)
C2H2 Zn finger 570..590 CDD:275368 5/23 (22%)
C2H2 Zn finger 598..618 CDD:275368 1/19 (5%)
C2H2 Zn finger 652..672 CDD:275368 5/19 (26%)
zf-H2C2_2 664..689 CDD:404364 10/24 (42%)
C2H2 Zn finger 680..700 CDD:275368 7/19 (37%)
COG5048 695..>801 CDD:227381 34/112 (30%)
C2H2 Zn finger 708..728 CDD:275368 6/19 (32%)
C2H2 Zn finger 736..756 CDD:275368 7/19 (37%)
C2H2 Zn finger 809..827 CDD:275368 2/20 (10%)
zf-H2C2_2 819..843 CDD:404364 8/29 (28%)
C2H2 Zn finger 835..855 CDD:275368 6/19 (32%)
C2H2 Zn finger 863..885 CDD:275368 6/21 (29%)
C2H2 Zn finger 899..919 CDD:275368 6/19 (32%)
C2H2 Zn finger 927..947 CDD:275368 6/19 (32%)
zf-H2C2_2 939..962 CDD:404364 11/24 (46%)
C2H2 Zn finger 955..976 CDD:275368 5/22 (23%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24384
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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