DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment jim and Zfp334

DIOPT Version :10

Sequence 1:NP_001262221.1 Gene:jim / 43924 FlyBaseID:FBgn0027339 Length:938 Species:Drosophila melanogaster
Sequence 2:XP_006499440.1 Gene:Zfp334 / 228876 MGIID:2388656 Length:690 Species:Mus musculus


Alignment Length:667 Identity:165/667 - (24%)
Similarity:235/667 - (35%) Gaps:200/667 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   137 VQQQQRANGAGDEDPMNHQLANQQNPAPNQNQSSNDPQHSGSNAGESGNP------------HVQ 189
            |:...|.|.|.|::|:......|.......:..::.|....:|..|...|            |..
Mouse    80 VENLSRQNHAEDDEPLEKDKKTQDKHLKQFSVVNSKPMLEKANLSEKTVPLNMNSVSSGKTLHKY 144

  Fly   190 QNGGP--QNDPGNSFRTPDYYDPRHAAPQGGMLAPPGFPPLH------------YLNKGVLPMEQ 240
            ..||.  :|:...:...|...:.:.||.|.|.    |.|.||            |....|..::.
Mouse   145 DPGGNGLENNSEKTIAKPSKANGKVAADQDGR----GKPALHTKADRSHSAAKRYRRNEVRDVKG 205

  Fly   241 SGGGGGAGGGEAYALPEMLPAQQNGQQNAGPANTNANEGGAGANGSGGVGGA------------- 292
            .|.|              |..|||.|..:.|     :|...|...|.|...:             
Mouse   206 QGEG--------------LTQQQNTQSASQP-----SEHREGEQESAGAARSEEQPERKRNECAE 251

  Fly   293 -----TGASVGVGSVGVTSGGR------------------------TGNGPGRPHKNKP------ 322
                 :..|..:..:.:.:|.|                        ||.   ||:|.|.      
Mouse   252 CRKTFSKRSTLIVHLRIHTGERPYACNYCRKTFRIKASLTRHQRIHTGE---RPYKCKECGKAFI 313

  Fly   323 -----------HSDLRLFKCLTCGKDFKQKSTLLQHDRIHTDARPFPCSECGKRFRQQSH----- 371
                       |...:.::|..|||.|.:||.|.:|.|.||..:|:.|.|||..|.::|:     
Mouse   314 DKSALIVHQRIHGGEKSYECNECGKTFFRKSALAEHFRSHTGEKPYKCKECGNAFGKKSYLIVHQ 378

  Fly   372 -----------------------LTQHLRIHANEKPFTCPYCSRSFRQRAILNQHIRIHSGEKP- 412
                                   ||.|.|||..|||:.|..|.::|..::.||.|:|.|:|||| 
Mouse   379 RTHRGEKPNECKECGKTFFCLSALTAHQRIHTGEKPYECKECDKTFFCQSALNVHLRSHTGEKPY 443

  Fly   413 ---------------------------FACPECGKHFRQKAILNQHVRTHQDVSPHLIFKNGPHP 450
                                       |.||||||.|..|:.|..|.|||......|:.|     
Mouse   444 KCRLCGKYLCTKSALVAHQVIHRGKKTFECPECGKLFYLKSTLTIHQRTHTGEKHGLLSK----- 503

  Fly   451 TLWP-SDVPFPGEDNDTKGDIAGTGGGYHDEDSQGTPDGSGGMHYPSYFKDGKGQKILPEVLQHI 514
              |. :....|......:.|........||.............|..:.::               
Mouse   504 --WSRASAAKPNCSEQKRADAKDNVHECHDHKRPAHKSSRRFAHKRTIWE--------------- 551

  Fly   515 GVRPANMPLYVRCPICDKEFKQKTTLLQHGCIHIESRPYPCPECGKRFRQQSHLTQHLRIHTNEK 579
              ||      ..|..|.:.:.:|:.|..|...|...|||.|.||||.|.|:...|:|.|.||.||
Mouse   552 --RP------YECEECGRTYCRKSALRHHQKTHTGERPYECKECGKTFCQKVSFTEHQRTHTGEK 608

  Fly   580 PFGCMYCPRFFRQRTILNQHLRIHTGEKPYKCGQCGKDFRQKAILDQHTRTHQGDRPFCCPMPNC 644
            |..|..|.:.||.::....|.|||||||||.|.:|||.:|:...|.:|.:.|.|::|:.|.:  |
Mouse   609 PHKCKECGKSFRHKSAFTVHKRIHTGEKPYACNECGKSYRRLWTLTEHQKIHTGEKPYECNL--C 671

  Fly   645 RRRFATENEVTKHIDNH 661
            ::.|..::....|...|
Mouse   672 KKSFRHKSNFLLHQKTH 688

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
jimNP_001262221.1 C2H2 Zn finger 331..351 CDD:275368 10/19 (53%)
COG5048 355..666 CDD:227381 105/364 (29%)
C2H2 Zn finger 359..379 CDD:275368 10/47 (21%)
C2H2 Zn finger 387..407 CDD:275368 7/19 (37%)
C2H2 Zn finger 415..435 CDD:275368 11/19 (58%)
C2H2 Zn finger 527..547 CDD:275368 5/19 (26%)
C2H2 Zn finger 555..575 CDD:275368 10/19 (53%)
C2H2 Zn finger 583..603 CDD:275368 6/19 (32%)
C2H2 Zn finger 611..631 CDD:275368 7/19 (37%)
C2H2 Zn finger 639..661 CDD:275368 4/21 (19%)
Zfp334XP_006499440.1 KRAB 20..79 CDD:214630
C2H2 Zn finger 249..269 CDD:275368 1/19 (5%)
COG5048 273..689 CDD:227381 125/451 (28%)
C2H2 Zn finger 277..297 CDD:275368 0/19 (0%)
C2H2 Zn finger 305..325 CDD:275368 1/19 (5%)
C2H2 Zn finger 333..353 CDD:275368 10/19 (53%)
C2H2 Zn finger 361..381 CDD:275368 6/19 (32%)
C2H2 Zn finger 389..409 CDD:275368 4/19 (21%)
C2H2 Zn finger 417..437 CDD:275368 7/19 (37%)
C2H2 Zn finger 445..465 CDD:275368 0/19 (0%)
C2H2 Zn finger 473..493 CDD:275368 11/19 (58%)
C2H2 Zn finger 556..576 CDD:275368 5/19 (26%)
C2H2 Zn finger 584..604 CDD:275368 10/19 (53%)
C2H2 Zn finger 612..632 CDD:275368 6/19 (32%)
C2H2 Zn finger 640..660 CDD:275368 7/19 (37%)
C2H2 Zn finger 668..688 CDD:275368 4/21 (19%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.