DRSC/TRiP Functional Genomics Resources

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Protein Alignment jim and Zfp26

DIOPT Version :10

Sequence 1:NP_001262221.1 Gene:jim / 43924 FlyBaseID:FBgn0027339 Length:938 Species:Drosophila melanogaster
Sequence 2:NP_001394469.1 Gene:Zfp26 / 22688 MGIID:99173 Length:965 Species:Mus musculus


Alignment Length:373 Identity:125/373 - (33%)
Similarity:171/373 - (45%) Gaps:70/373 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   323 HSDLRLFKCLTCGKDFKQKSTLLQHDRIHTDARPFPCSECGKRFRQQSHLTQHLRIHANEKPFTC 387
            |:..:.:.|..|||.|.::|:|:.|.|.||..:.:.|.||||.|.|.|.||:|:|.|..|||:.|
Mouse   372 HTVEKPYDCKECGKAFTERSSLIVHLRQHTREKSYECKECGKTFIQPSRLTEHMRSHTGEKPYQC 436

  Fly   388 PYCSRSFRQRAILNQHIRIHSGEKPFACPECGKHFRQKAILNQHVRTHQDVSP------------ 440
            ..|..:|...:.|..|:|.|:|||||.|..|||.|.:.:.|..|:|||....|            
Mouse   437 DQCGNAFASSSYLTTHLRTHTGEKPFECNICGKAFTRSSYLLGHIRTHTGEKPYECKVCGKAFSG 501

  Fly   441 ------HLIFKNGPHPTLWPSDVPFPGEDNDTKGDIAGTGGGYHDEDSQGTPDGSGGMHYPSYFK 499
                  ||....|..|  :|.          |:.:.|.|......|                :.|
Mouse   502 RSWLTIHLRKHTGERP--YPC----------TECEKAFTSFAQLTE----------------HIK 538

  Fly   500 DGKGQK----------------ILPEVLQHIGVRPANMPLYVRCPICDKEFKQKTTLLQHGCIHI 548
            ...|:|                :......|.|::|      .:|..|.|.|..::.|.:|..||.
Mouse   539 THTGEKPFRCKVCARTFRNSSCLKTHFRIHTGIKP------YKCNYCGKAFTARSGLTKHVLIHN 597

  Fly   549 ESRPYPCPECGKRFRQQSHLTQHLRIHTNEKPFGCMYCPRFFRQRTILNQHLRIHTGEKPYKCGQ 613
            ..:||.|.||||.|...|.|.:|:||||.||||.|..|.:.....:.|..|||.||||||::|.|
Mouse   598 GEKPYECKECGKAFSTSSGLVEHIRIHTGEKPFECYQCGKALAHSSSLVGHLRTHTGEKPFECNQ 662

  Fly   614 CGKDFRQKAILDQHTRTHQGDRPFCCPMPNCRRRFATENEVTKHIDNH 661
            |.|.|.:.:.|..|.|||.|::|:.|  ..|.:.|...:.:||||..|
Mouse   663 CDKTFTRSSYLRIHMRTHTGEKPYEC--KECGKTFPERSCLTKHIRTH 708

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
jimNP_001262221.1 C2H2 Zn finger 331..351 CDD:275368 9/19 (47%)
COG5048 355..666 CDD:227381 113/341 (33%)
C2H2 Zn finger 359..379 CDD:275368 12/19 (63%)
C2H2 Zn finger 387..407 CDD:275368 6/19 (32%)
C2H2 Zn finger 415..435 CDD:275368 8/19 (42%)
C2H2 Zn finger 527..547 CDD:275368 6/19 (32%)
C2H2 Zn finger 555..575 CDD:275368 10/19 (53%)
C2H2 Zn finger 583..603 CDD:275368 6/19 (32%)
C2H2 Zn finger 611..631 CDD:275368 8/19 (42%)
C2H2 Zn finger 639..661 CDD:275368 7/21 (33%)
Zfp26NP_001394469.1 KRAB 113..171 CDD:214630
C2H2 Zn finger 297..317 CDD:275368
COG5048 325..760 CDD:227381 125/373 (34%)
C2H2 Zn finger 352..372 CDD:275368 125/373 (34%)
C2H2 Zn finger 380..400 CDD:275368 9/19 (47%)
C2H2 Zn finger 408..428 CDD:275368 12/19 (63%)
C2H2 Zn finger 436..456 CDD:275368 6/19 (32%)
C2H2 Zn finger 464..484 CDD:275368 8/19 (42%)
C2H2 Zn finger 492..512 CDD:275368 2/19 (11%)
C2H2 Zn finger 520..540 CDD:275368 5/45 (11%)
C2H2 Zn finger 548..568 CDD:275368 0/19 (0%)
C2H2 Zn finger 576..596 CDD:275368 6/19 (32%)
COG5048 600..956 CDD:227381 51/111 (46%)
C2H2 Zn finger 604..624 CDD:275368 10/19 (53%)
C2H2 Zn finger 632..652 CDD:275368 6/19 (32%)
C2H2 Zn finger 660..680 CDD:275368 8/19 (42%)
C2H2 Zn finger 688..708 CDD:275368 7/21 (33%)
C2H2 Zn finger 716..736 CDD:275368
C2H2 Zn finger 744..764 CDD:275368
C2H2 Zn finger 772..792 CDD:275368
C2H2 Zn finger 800..820 CDD:275368
C2H2 Zn finger 828..848 CDD:275368
C2H2 Zn finger 856..876 CDD:275368
C2H2 Zn finger 884..904 CDD:275368
C2H2 Zn finger 912..932 CDD:275368
C2H2 Zn finger 940..956 CDD:275368
Blue background indicates that the domain is not in the aligned region.

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