DRSC/TRiP Functional Genomics Resources

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Protein Alignment jim and Zfp11

DIOPT Version :9

Sequence 1:NP_001262221.1 Gene:jim / 43924 FlyBaseID:FBgn0027339 Length:938 Species:Drosophila melanogaster
Sequence 2:NP_766050.1 Gene:Zfp11 / 22648 MGIID:99156 Length:647 Species:Mus musculus


Alignment Length:371 Identity:129/371 - (34%)
Similarity:188/371 - (50%) Gaps:43/371 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   316 RPHKNK-----------------PHSDLRLFKCLTCGKDFKQKSTLLQHDRIHTDARPFPCSECG 363
            :|||.:                 .|:..:.|||..||:.||..|||.||:.|||:|:|:.|.|||
Mouse   111 KPHKCEECGRAFSALSVLTQHRITHTGEKPFKCKECGRAFKYNSTLTQHEVIHTEAKPYRCQECG 175

  Fly   364 KRFRQQSHLTQHLRIHANEKPFTCPYCSRSFRQRAILNQHIRIHSGEKPFACPECGKHFRQKAIL 428
            |.|::...|:||..||..|||..|..|.|:|.:.:.|.||..||:||||:.|.||||.||.::.|
Mouse   176 KAFKRSHTLSQHQVIHKGEKPHKCDECGRAFSKHSSLTQHQVIHTGEKPYQCRECGKAFRYQSTL 240

  Fly   429 NQHVRTHQDVSPHLIFKNGPHPTLWPS-DVPFPGEDNDTKGDIAGTGGGYHDEDSQGTPDGSGG- 491
            .:|         |:: ..|..|...|. |..|......::..|..||...:.....|....... 
Mouse   241 TRH---------HIV-HTGAKPYKCPECDKAFNNSSTLSRHQIIHTGEKPYKCQECGRAFYCSSF 295

  Fly   492 --MHYPSYFKD--------GKGQKILPEVLQHIGVRPANMPLYVRCPICDKEFKQKTTLLQHGCI 546
              .|...:|::        ||..::..::::|..:.....| |: |..|.|.||.::.|.:|..:
Mouse   296 LIQHMKIHFEEMPYRCRECGKPFRLSSQLIRHQRIHTGEEP-YI-CRECGKTFKYQSNLTRHQIL 358

  Fly   547 HIESRPYPCPECGKRFRQQSHLTQHLRIHTNEKPFGCMYCPRFFRQRTILNQHLRIHTGEKPYKC 611
            |..::||.||||||.|...|.||:|..|||.|||:.|..|.:.|...:.|.||::||..|.||:|
Mouse   359 HTGAKPYKCPECGKAFNNSSTLTRHQIIHTGEKPYKCQECSKAFYCSSYLIQHMKIHFEEIPYRC 423

  Fly   612 GQCGKDFRQKAILDQHTRTHQGDRPFCCPMPNCRRRFATENEVTKH 657
            .:|||.|:..:.|.:|.|.|.|::|:.|  ..|.:.|...:.:|||
Mouse   424 KECGKPFKCSSQLIRHQRIHSGEKPYIC--KECGKAFNCTSYLTKH 467

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
jimNP_001262221.1 C2H2 Zn finger 331..351 CDD:275368 10/19 (53%)
COG5048 355..666 CDD:227381 109/315 (35%)
zf-C2H2 357..379 CDD:278523 9/21 (43%)
C2H2 Zn finger 359..379 CDD:275368 9/19 (47%)
zf-H2C2_2 371..396 CDD:290200 12/24 (50%)
C2H2 Zn finger 387..407 CDD:275368 7/19 (37%)
zf-H2C2_2 400..424 CDD:290200 15/23 (65%)
C2H2 Zn finger 415..435 CDD:275368 9/19 (47%)
C2H2 Zn finger 527..547 CDD:275368 7/19 (37%)
zf-C2H2 553..575 CDD:278523 12/21 (57%)
C2H2 Zn finger 555..575 CDD:275368 11/19 (58%)
C2H2 Zn finger 583..603 CDD:275368 6/19 (32%)
zf-H2C2_2 596..620 CDD:290200 13/23 (57%)
C2H2 Zn finger 611..631 CDD:275368 8/19 (42%)
zf-H2C2_2 624..650 CDD:290200 9/25 (36%)
C2H2 Zn finger 639..661 CDD:275368 6/19 (32%)
Zfp11NP_766050.1 C2H2 Zn finger 59..79 CDD:275368
COG5048 83..460 CDD:227381 126/362 (35%)
C2H2 Zn finger 87..107 CDD:275368
C2H2 Zn finger 115..135 CDD:275368 0/19 (0%)
zf-H2C2_2 128..152 CDD:290200 7/23 (30%)
C2H2 Zn finger 143..163 CDD:275368 10/19 (53%)
C2H2 Zn finger 171..191 CDD:275368 9/19 (47%)
C2H2 Zn finger 199..219 CDD:275368 7/19 (37%)
C2H2 Zn finger 227..247 CDD:275368 10/29 (34%)
C2H2 Zn finger 255..275 CDD:275368 4/19 (21%)
C2H2 Zn finger 283..303 CDD:275368 2/19 (11%)
DUF45 <308..349 CDD:302795 10/42 (24%)
C2H2 Zn finger 311..331 CDD:275368 3/19 (16%)
COG5048 335..>645 CDD:227381 57/137 (42%)
C2H2 Zn finger 339..359 CDD:275368 7/19 (37%)
C2H2 Zn finger 367..387 CDD:275368 11/19 (58%)
C2H2 Zn finger 395..415 CDD:275368 6/19 (32%)
C2H2 Zn finger 423..443 CDD:275368 8/19 (42%)
C2H2 Zn finger 451..471 CDD:275368 6/19 (32%)
zf-H2C2_2 463..488 CDD:290200 3/5 (60%)
C2H2 Zn finger 479..499 CDD:275368
C2H2 Zn finger 507..527 CDD:275368
zf-H2C2_2 520..544 CDD:290200
C2H2 Zn finger 535..555 CDD:275368
C2H2 Zn finger 563..583 CDD:275368
C2H2 Zn finger 591..611 CDD:275368
zf-H2C2_2 604..628 CDD:290200
C2H2 Zn finger 619..639 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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