| Sequence 1: | NP_001262221.1 | Gene: | jim / 43924 | FlyBaseID: | FBgn0027339 | Length: | 938 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_001024696.1 | Gene: | lsy-2 / 180522 | WormBaseID: | WBGene00003087 | Length: | 365 | Species: | Caenorhabditis elegans |
| Alignment Length: | 257 | Identity: | 69/257 - (26%) |
|---|---|---|---|
| Similarity: | 105/257 - (40%) | Gaps: | 56/257 - (21%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 359 CSECGKRFRQQSHLTQHLRIHANEKPFTCPYCSRSFRQRAILNQHIRIHSGEKPFACPECGKHFR 423
Fly 424 QKAILNQHVRTHQDVSPHL-----IFKNGPHPTLWPSDVPFPGEDNDTKGDIAGTGGGYHDEDSQ 483
Fly 484 --------GTPDGSGGMHYPSYFKDGKGQKILPEVLQHIGVRPANMPLYVR-------------- 526
Fly 527 --------CPICDKEFKQKTTLLQHGCI----HIESRPYPCPECGKRFRQQSHLTQHLRIHT 576 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| jim | NP_001262221.1 | C2H2 Zn finger | 331..351 | CDD:275368 | |
| COG5048 | 355..666 | CDD:227381 | 69/257 (27%) | ||
| C2H2 Zn finger | 359..379 | CDD:275368 | 7/19 (37%) | ||
| C2H2 Zn finger | 387..407 | CDD:275368 | 8/19 (42%) | ||
| C2H2 Zn finger | 415..435 | CDD:275368 | 10/19 (53%) | ||
| C2H2 Zn finger | 527..547 | CDD:275368 | 5/23 (22%) | ||
| C2H2 Zn finger | 555..575 | CDD:275368 | 5/19 (26%) | ||
| C2H2 Zn finger | 583..603 | CDD:275368 | |||
| C2H2 Zn finger | 611..631 | CDD:275368 | |||
| C2H2 Zn finger | 639..661 | CDD:275368 | |||
| lsy-2 | NP_001024696.1 | SFP1 | <16..158 | CDD:227516 | 36/77 (47%) |
| C2H2 Zn finger | 80..100 | CDD:275368 | 7/19 (37%) | ||
| COG5048 | 102..>156 | CDD:227381 | 25/53 (47%) | ||
| C2H2 Zn finger | 108..128 | CDD:275368 | 8/19 (42%) | ||
| C2H2 Zn finger | 136..156 | CDD:275368 | 10/19 (53%) | ||
| Blue background indicates that the domain is not in the aligned region. | |||||