DRSC/TRiP Functional Genomics Resources

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Protein Alignment jim and ZNF676

DIOPT Version :9

Sequence 1:NP_001262221.1 Gene:jim / 43924 FlyBaseID:FBgn0027339 Length:938 Species:Drosophila melanogaster
Sequence 2:NP_001001411.2 Gene:ZNF676 / 163223 HGNCID:20429 Length:588 Species:Homo sapiens


Alignment Length:335 Identity:114/335 - (34%)
Similarity:161/335 - (48%) Gaps:58/335 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   323 HSDLRLFKCLTCGKDFKQKSTLLQHDRIHTDARPFPCSECGKRFRQQSHLTQHLRIHANEKPFTC 387
            |::.:.:||..|||.....|.|::|.||||..:|:.|.||||.|...|.||:|.||||.|||:.|
Human   275 HAEEKPYKCEECGKASNSSSKLMEHKRIHTGEKPYKCEECGKAFSWSSSLTEHKRIHAGEKPYKC 339

  Fly   388 PYCSRSFRQRAILNQHIRIHSGEKPFACPECGKHFRQKAILNQHVRTHQDVSPHLIFKNGPHPTL 452
            ..|.::|.:.:||.:|..||:||||:.|..|||.|.:.:.||.|...|.:..|            
Human   340 EECGKAFNRSSILTKHKIIHTGEKPYKCEGCGKAFSKVSTLNTHKAIHAEEKP------------ 392

  Fly   453 WPSDVPFPGEDNDTKGDIAGTGGGYHDEDSQGTPDGSGGMHYPSYFKDGKGQKILPEVLQHIGVR 517
                                    |..|:.                  ||......::::|..:.
Human   393 ------------------------YKCEEC------------------GKASNSSSKLMEHKRIH 415

  Fly   518 PANMPLYVRCPICDKEFKQKTTLLQHGCIHIESRPYPCPECGKRFRQQSHLTQHLRIHTNEKPFG 582
            ....|  .:|..|.|.|...::|.:|..||...:||.|.||||.|...|..|:|.|||..|||:.
Human   416 TGEKP--YKCEECGKAFSWSSSLTEHKRIHAGEKPYKCEECGKAFTWSSSFTKHKRIHAAEKPYK 478

  Fly   583 CMYCPRFFRQRTILNQHLRIHTGEKPYKCGQCGKDFRQKAILDQHTRTHQGDRPFCCPMPNCRRR 647
            |..|.:.|...:||.:|..||||||.|||.:|||.|...:||.:|...|.|::|:.|  ..|.:.
Human   479 CEECGKGFSTFSILTKHKIIHTGEKRYKCEECGKAFSWSSILTEHKIIHTGEKPYKC--EECGKA 541

  Fly   648 FATENEVTKH 657
            |:..:.:|:|
Human   542 FSRSSSLTRH 551

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
jimNP_001262221.1 C2H2 Zn finger 331..351 CDD:275368 8/19 (42%)
COG5048 355..666 CDD:227381 101/303 (33%)
zf-C2H2 357..379 CDD:278523 11/21 (52%)
C2H2 Zn finger 359..379 CDD:275368 11/19 (58%)
zf-H2C2_2 371..396 CDD:290200 13/24 (54%)
C2H2 Zn finger 387..407 CDD:275368 6/19 (32%)
zf-H2C2_2 400..424 CDD:290200 13/23 (57%)
C2H2 Zn finger 415..435 CDD:275368 8/19 (42%)
C2H2 Zn finger 527..547 CDD:275368 6/19 (32%)
zf-C2H2 553..575 CDD:278523 11/21 (52%)
C2H2 Zn finger 555..575 CDD:275368 10/19 (53%)
C2H2 Zn finger 583..603 CDD:275368 6/19 (32%)
zf-H2C2_2 596..620 CDD:290200 15/23 (65%)
C2H2 Zn finger 611..631 CDD:275368 8/19 (42%)
zf-H2C2_2 624..650 CDD:290200 8/25 (32%)
C2H2 Zn finger 639..661 CDD:275368 5/19 (26%)
ZNF676NP_001001411.2 KRAB <1..32 CDD:214630
C2H2 Zn finger 114..135 CDD:275370
C2H2 Zn finger 143..163 CDD:275368
C2H2 Zn finger 171..191 CDD:275368
COG5048 195..580 CDD:227381 114/335 (34%)
C2H2 Zn finger 199..219 CDD:275368
zf-H2C2_2 212..236 CDD:290200
C2H2 Zn finger 227..247 CDD:275368
zf-H2C2_2 240..264 CDD:290200
C2H2 Zn finger 255..275 CDD:275368 114/335 (34%)
C2H2 Zn finger 283..303 CDD:275368 8/19 (42%)
zf-H2C2_2 296..319 CDD:290200 12/22 (55%)
C2H2 Zn finger 311..331 CDD:275368 11/19 (58%)
zf-H2C2_2 323..348 CDD:290200 13/24 (54%)
C2H2 Zn finger 339..359 CDD:275368 6/19 (32%)
zf-H2C2_2 352..375 CDD:290200 12/22 (55%)
C2H2 Zn finger 367..387 CDD:275368 8/19 (42%)
C2H2 Zn finger 395..415 CDD:275368 4/37 (11%)
zf-H2C2_2 408..431 CDD:290200 5/24 (21%)
C2H2 Zn finger 423..443 CDD:275368 6/19 (32%)
zf-H2C2_2 435..459 CDD:290200 11/23 (48%)
C2H2 Zn finger 451..471 CDD:275368 10/19 (53%)
C2H2 Zn finger 479..499 CDD:275368 6/19 (32%)
zf-H2C2_2 492..515 CDD:290200 14/22 (64%)
C2H2 Zn finger 507..527 CDD:275368 8/19 (42%)
zf-H2C2_2 520..544 CDD:290200 8/25 (32%)
C2H2 Zn finger 535..555 CDD:275368 5/19 (26%)
zf-H2C2_2 547..572 CDD:290200 2/5 (40%)
C2H2 Zn finger 563..583 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24384
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
11.100

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