DRSC/TRiP Functional Genomics Resources

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Protein Alignment jim and ZNF836

DIOPT Version :10

Sequence 1:NP_001262221.1 Gene:jim / 43924 FlyBaseID:FBgn0027339 Length:938 Species:Drosophila melanogaster
Sequence 2:NP_001096127.1 Gene:ZNF836 / 162962 HGNCID:34333 Length:936 Species:Homo sapiens


Alignment Length:367 Identity:129/367 - (35%)
Similarity:175/367 - (47%) Gaps:63/367 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   321 KPHSDLRLFKCLTCGKDFKQKSTLLQHDRIHTDARPFPCSECGKRFRQQSHLTQHLRIHANEKPF 385
            |.|...:.:.|..|||.|:..|:|:.|..:||..:|:.|:||||.|.:.|.||.|..:|...||:
Human   210 KTHIREKPYMCKGCGKAFRVSSSLINHQMVHTTEKPYKCNECGKAFHRGSLLTIHQIVHTRGKPY 274

  Fly   386 TCPYCSRSFRQRAILNQHIRIHSGEKPFACPECGKHFRQKAILNQHVRTHQDVSPH------LIF 444
            .|..|.:.|||.:.|..|.|.|:||||:.|.||||.|.|...|..|.|.|....|:      ..|
Human   275 QCGVCGKIFRQNSDLVNHRRSHTGEKPYKCNECGKSFSQSYNLAIHQRIHTGEKPYKCNECGKTF 339

  Fly   445 KNG----PHPTLWPSDVPFPGEDNDTKGDIAGTGGGYHDEDSQGTPDGSGGMHYPSYFKDGKG-- 503
            |.|    .|..:...:.|:       :.||.|                       ..|:....  
Human   340 KQGSCLTTHQIIHTGEKPY-------QCDICG-----------------------KVFRQNSNLV 374

  Fly   504 --QKILPEVLQHIGVRPANMPLYVRCPICDKEFKQKTTLLQHGCIHIESRPYPCPECGKRFRQQS 566
              |:|      |.|.:|      .:|.||.|.|.|.:.|..|..:|..::||.|.||||.|::.|
Human   375 NHQRI------HTGEKP------YKCNICGKSFSQSSNLATHQTVHSGNKPYKCDECGKTFKRSS 427

  Fly   567 HLTQHLRIHTNEKPFGCMYCPRFFRQRTILNQHLRIHTGEKPYKCGQCGKDFRQKAILDQHTRTH 631
            .||.|..|||.|||:.|..|.:.|.||:.|.:|.|.|||||||||.:|||.|.|.:.|..|.|.|
Human   428 SLTTHQIIHTGEKPYTCDVCDKVFSQRSQLARHQRSHTGEKPYKCNECGKVFSQTSHLVGHRRIH 492

  Fly   632 QGDRPFCCPMPNCRRRFATENEVTKHIDNHMNPNTTKVRRQQ 673
            .|::|:.|  ..|.:.|...:.:|:|...|     |:.:|.|
Human   493 TGEKPYKC--DKCGKAFKQGSLLTRHKIIH-----TREKRYQ 527

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
jimNP_001262221.1 C2H2 Zn finger 331..351 CDD:275368 8/19 (42%)
COG5048 355..666 CDD:227381 114/324 (35%)
C2H2 Zn finger 359..379 CDD:275368 10/19 (53%)
C2H2 Zn finger 387..407 CDD:275368 8/19 (42%)
C2H2 Zn finger 415..435 CDD:275368 10/19 (53%)
C2H2 Zn finger 527..547 CDD:275368 8/19 (42%)
C2H2 Zn finger 555..575 CDD:275368 10/19 (53%)
C2H2 Zn finger 583..603 CDD:275368 8/19 (42%)
C2H2 Zn finger 611..631 CDD:275368 9/19 (47%)
C2H2 Zn finger 639..661 CDD:275368 5/21 (24%)
ZNF836NP_001096127.1 KRAB 7..48 CDD:460171
SFP1 <215..297 CDD:227516 32/81 (40%)
C2H2 Zn finger 220..240 CDD:275368 8/19 (42%)
C2H2 Zn finger 248..268 CDD:275368 10/19 (53%)
COG5048 272..648 CDD:227381 105/305 (34%)
C2H2 Zn finger 276..296 CDD:275368 8/19 (42%)
C2H2 Zn finger 304..324 CDD:275368 10/19 (53%)
C2H2 Zn finger 332..352 CDD:275368 4/19 (21%)
C2H2 Zn finger 360..380 CDD:275368 6/48 (13%)
C2H2 Zn finger 388..408 CDD:275368 8/19 (42%)
C2H2 Zn finger 416..436 CDD:275368 10/19 (53%)
C2H2 Zn finger 444..464 CDD:275368 8/19 (42%)
C2H2 Zn finger 472..492 CDD:275368 9/19 (47%)
COG5048 496..904 CDD:227381 10/39 (26%)
C2H2 Zn finger 500..520 CDD:275368 5/21 (24%)
C2H2 Zn finger 528..548 CDD:275368 129/367 (35%)
C2H2 Zn finger 556..576 CDD:275368
C2H2 Zn finger 584..604 CDD:275368
C2H2 Zn finger 612..632 CDD:275368
C2H2 Zn finger 640..660 CDD:275368
C2H2 Zn finger 668..688 CDD:275368
C2H2 Zn finger 696..714 CDD:275370
C2H2 Zn finger 724..744 CDD:275368
C2H2 Zn finger 752..772 CDD:275368
C2H2 Zn finger 780..800 CDD:275368
C2H2 Zn finger 808..828 CDD:275368
C2H2 Zn finger 836..856 CDD:275368
C2H2 Zn finger 864..884 CDD:275368
C2H2 Zn finger 892..912 CDD:275368
Blue background indicates that the domain is not in the aligned region.

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