DRSC/TRiP Functional Genomics Resources

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Protein Alignment jim and LOC1279969

DIOPT Version :10

Sequence 1:NP_001262221.1 Gene:jim / 43924 FlyBaseID:FBgn0027339 Length:938 Species:Drosophila melanogaster
Sequence 2:XP_061514535.1 Gene:LOC1279969 / 1279969 VectorBaseID:AGAMI1_012132 Length:545 Species:Anopheles gambiae


Alignment Length:405 Identity:94/405 - (23%)
Similarity:138/405 - (34%) Gaps:133/405 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   303 GVTSGGRTGNGPGRPHKNKPHSDLRLFKCLTCGKDFKQKSTLLQHDRIHTDARPFP------CSE 361
            |..||.:.....|:.....|..          |.|....:..||..|..|.....|      |..
Mosquito   215 GSASGTKREQSKGKDDSESPID----------GDDESVPAKQLQKRRYTTTRGASPNQQVHQCKY 269

  Fly   362 CGKRFRQQSHLTQHLRIHANE--KP-FTCPYCSRSFRQRAILNQHIR-IHSGEKPFACPECGKHF 422
            |.|.|:..|.||:|..||..:  || ::|..|.:.|.:.:|...|:| :|.|.||:.|.||||.|
Mosquito   270 CRKTFKCNSQLTRHEYIHLTQDGKPRYSCEICRKVFTKSSIRRAHMRMMHEGAKPYMCEECGKPF 334

  Fly   423 RQKAILNQHVRTHQDVSPHLIFKNGPHPTLWPSDVPFPGEDNDTKGDIAGTGGGYHDEDSQGTPD 487
            ..|..|.:|...|.:..|                                               
Mosquito   335 SSKGALKEHYIVHSEERP----------------------------------------------- 352

  Fly   488 GSGGMHYPSYFKDGKGQKILPEVLQHIGVRPANMPLYVRCPICDKEFKQKTTLLQHGCIHIESRP 552
                      ||                           |..|.|.||....|..|...|.::. 
Mosquito   353 ----------FK---------------------------CAYCPKSFKNAPRLKTHEDTHNDTL- 379

  Fly   553 YPCPECGKRFRQQSHLTQHLRIHTNEKPFGCMYCPRFFRQRTILNQHLRIHTGEKPYKCGQCGKD 617
            |.||.||.:...:..|..|:.:|:::|.|.|..|...:::...|..||.:|||.:||:|..|.|.
Mosquito   380 YVCPHCGLKLNTKRTLNMHMVVHSDQKKFKCQECGNEYKRSKALKAHLILHTGLRPYQCPFCDKT 444

  Fly   618 FRQKAILDQHTRTHQ---------------GDRPFC-CP-MPNCRRRFATENE----VTKHIDN- 660
            |..    ..:.|:|:               |.:|.. .| :.:.:|:..::.|    ..|||.: 
Mosquito   445 FAN----GSNCRSHKKKFHPRELAALEAAGGQKPAANIPKLEHLQRKSQSDGEGVEITRKHIRST 505

  Fly   661 --HMNPNTTKVRRQQ 673
              ..|.|..|.|::|
Mosquito   506 ARASNSNRGKERQEQ 520

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
jimNP_001262221.1 C2H2 Zn finger 331..351 CDD:275368 5/19 (26%)
COG5048 355..666 CDD:227381 79/344 (23%)
C2H2 Zn finger 359..379 CDD:275368 8/19 (42%)
C2H2 Zn finger 387..407 CDD:275368 6/20 (30%)
C2H2 Zn finger 415..435 CDD:275368 9/19 (47%)
C2H2 Zn finger 527..547 CDD:275368 7/19 (37%)
C2H2 Zn finger 555..575 CDD:275368 6/19 (32%)
C2H2 Zn finger 583..603 CDD:275368 5/19 (26%)
C2H2 Zn finger 611..631 CDD:275368 5/19 (26%)
C2H2 Zn finger 639..661 CDD:275368 6/29 (21%)
LOC1279969XP_061514535.1 None

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