DRSC/TRiP Functional Genomics Resources

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Protein Alignment jim and ZNF573

DIOPT Version :10

Sequence 1:NP_001262221.1 Gene:jim / 43924 FlyBaseID:FBgn0027339 Length:938 Species:Drosophila melanogaster
Sequence 2:NP_001166161.1 Gene:ZNF573 / 126231 HGNCID:26420 Length:665 Species:Homo sapiens


Alignment Length:340 Identity:114/340 - (33%)
Similarity:160/340 - (47%) Gaps:59/340 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   318 HKNKPHSDLRLFKCLTCGKDFKQKSTLLQHDRIHTDARPFPCSECGKRFRQQSHLTQHLRIHANE 382
            |:| .|:..:||:|..|||.:...|.|.||.:.||..:|:.|.||||.|....:|.||.:||...
Human   376 HQN-IHTGEKLFECKQCGKTYTTGSKLFQHQKTHTGEKPYECKECGKAFSLYGYLKQHQKIHTGM 439

  Fly   383 KPFTCPYCSRSFRQRAILNQHIRIHSGEKPFACPECGKHFRQKAILNQHVRTHQDVSPHLIFKNG 447
            |.|.|..|.::|.....|.:|..||:|:|.|.|.||||.:...:.|.||.:||....|:...:.|
Human   440 KHFECKECKKTFTLYRNLTRHQNIHTGKKLFECQECGKAYSTGSNLIQHRKTHTGEKPYKCKECG 504

  Fly   448 PHPTLWPSDVPFPGEDNDTKGDIAGTGGGYHDEDSQGTPDGSGGMHYPSYFKDGKGQKILPEVLQ 512
            ...:|                      .||.::.                      |||      
Human   505 KTFSL----------------------HGYLNQH----------------------QKI------ 519

  Fly   513 HIGVRPANMPLYVRCPICDKEFKQKTTLLQHGCIHIESRPYPCPECGKRFRQQSHLTQHLRIHTN 577
            |.|::|      ..|.:|.|.|.....|..|..||.:.:|:.|.||||.||:.||||.|..||.:
Human   520 HTGMKP------YECKVCRKTFTFYRNLTLHQSIHTDEKPFECKECGKTFRRSSHLTAHQSIHAD 578

  Fly   578 EKPFGCMYCPRFFRQRTILNQHLRIHTGEKPYKCGQCGKDFRQKAILDQHTRTHQGDRPFCCPMP 642
            :||:.|..|.:.|:....|.||.:||||.|||:|.:|||.|.:.:.|.||.|.|.|::|:.|  .
Human   579 KKPYECKECGKAFKMYGYLTQHQKIHTGGKPYECKECGKAFSRASNLVQHERIHTGEKPYVC--K 641

  Fly   643 NCRRRFATENEVTKH 657
            .|.:.|...:.:..|
Human   642 QCGKTFRYGSALKAH 656

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
jimNP_001262221.1 C2H2 Zn finger 331..351 CDD:275368 8/19 (42%)
COG5048 355..666 CDD:227381 99/303 (33%)
C2H2 Zn finger 359..379 CDD:275368 9/19 (47%)
C2H2 Zn finger 387..407 CDD:275368 5/19 (26%)
C2H2 Zn finger 415..435 CDD:275368 8/19 (42%)
C2H2 Zn finger 527..547 CDD:275368 6/19 (32%)
C2H2 Zn finger 555..575 CDD:275368 12/19 (63%)
C2H2 Zn finger 583..603 CDD:275368 6/19 (32%)
C2H2 Zn finger 611..631 CDD:275368 9/19 (47%)
C2H2 Zn finger 639..661 CDD:275368 4/19 (21%)
ZNF573NP_001166161.1 KRAB 28..89 CDD:214630
C2H2 Zn finger 136..156 CDD:275368
COG5048 160..521 CDD:227381 57/195 (29%)
C2H2 Zn finger 164..184 CDD:275368
C2H2 Zn finger 192..212 CDD:275368
C2H2 Zn finger 220..240 CDD:275368
C2H2 Zn finger 248..268 CDD:275368
C2H2 Zn finger 276..292 CDD:275368
C2H2 Zn finger 304..324 CDD:275368
C2H2 Zn finger 332..352 CDD:275368
C2H2 Zn finger 360..380 CDD:275368 2/4 (50%)
C2H2 Zn finger 388..408 CDD:275368 8/19 (42%)
C2H2 Zn finger 416..436 CDD:275368 9/19 (47%)
COG5048 442..>664 CDD:227381 86/273 (32%)
C2H2 Zn finger 444..464 CDD:275368 5/19 (26%)
C2H2 Zn finger 472..492 CDD:275368 8/19 (42%)
C2H2 Zn finger 500..520 CDD:275368 7/69 (10%)
C2H2 Zn finger 528..548 CDD:275368 6/19 (32%)
C2H2 Zn finger 556..576 CDD:275368 12/19 (63%)
C2H2 Zn finger 584..604 CDD:275368 6/19 (32%)
C2H2 Zn finger 612..632 CDD:275368 9/19 (47%)
C2H2 Zn finger 640..660 CDD:275368 4/19 (21%)
Blue background indicates that the domain is not in the aligned region.

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