DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment jim and ZNF837

DIOPT Version :10

Sequence 1:NP_001262221.1 Gene:jim / 43924 FlyBaseID:FBgn0027339 Length:938 Species:Drosophila melanogaster
Sequence 2:NP_612475.1 Gene:ZNF837 / 116412 HGNCID:25164 Length:531 Species:Homo sapiens


Alignment Length:692 Identity:183/692 - (26%)
Similarity:248/692 - (35%) Gaps:257/692 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 QDTGQPYVLYKDSQDAERNPGAIGATPAQWGSEMYPNIQQQAQQHLTAQQQQQQQQQNAAQAAAQ 93
            |..||..:...|:|      ||.||      .|..|            ::.:..::..|.....|
Human     6 QKAGQGGLPKADAQ------GASGA------REKRP------------EEPRPLEEDRAGSRPTQ 46

  Fly    94 AAAVAAAAGQPQSPPGGGQEARDNGSGDGRQQQVSP------SSSPYPSVQQQQRANGAGDEDPM 152
            ...:..|||...:|||||......|        |||      |:...|.|::.     .|.....
Human    47 KGDLRGAAGGRTTPPGGGSRGCSLG--------VSPGPGTRHSAGTRPLVREP-----CGPTSSQ 98

  Fly   153 NHQLANQQNPAPNQNQSSNDPQHSGSNAGE-SGNPHVQ-QNGGPQNDPGNSFRTPDYYDP----- 210
            |.:|.     .|...|:...|..|.:..|: |.|..:. ..|.|..:      ||...||     
Human    99 NPELV-----IPEGLQAREGPCRSPARGGDCSRNSCLAWHRGAPAGE------TPPVCDPCPERI 152

  Fly   211 -RHAAPQ---------------GGMLAPPGFPPLHYLNKGVLPM-EQSGGGGGAGGGEAYA---- 254
             .|...|               |....|....|   .::|..|: ||.   .....|||:|    
Human   153 QNHPRTQLCEVHTDCWPCQPGTGAPTCPRTPKP---TSRGRNPLVEQP---RACACGEAFAWRAL 211

  Fly   255 -LP-EMLPAQQ--------------NGQQNAGPANTNANEGGAGANGSGGVGGATGASVGVGSVG 303
             :| |.|.|.:              |.||.||.:.....|                       .|
Human   212 RIPQERLQATEEPRPCARCGKRFRPNQQQQAGKSPPVCPE-----------------------CG 253

  Fly   304 VTSGGRTGNGPGRPHKNKPHSDL-RLFKCLTCGKDFKQKSTLLQHDRIHTDARPFPCSECGKRFR 367
            .||         ||....|.... ||:.|..|||.|.:.|:||||.||||..||:.|:||||.|.
Human   254 QTS---------RPRPIVPDPPAQRLYACDECGKAFTRTSSLLQHQRIHTGERPYECAECGKAFV 309

  Fly   368 QQSHLTQHLRIH------------------------------------ANEKPFTCPYCSRSFRQ 396
            :.|.|.:|.:.|                                    |.|||:.|..|:::|..
Human   310 RCSGLYRHQKTHSAERHRRGPVLARRAFRLGCPPCGDYSERSPRRGSGAGEKPYECADCAKAFGL 374

  Fly   397 RAILNQHIRIHSGEKPFACPECGKHFRQKAILNQHVRTHQDVSPHLIFKNGPHPTLWPSDVPFPG 461
            .:.|.:|.|:|:||||:|||||||.|.|::.|::|.|||....|:                    
Human   375 FSHLVEHRRVHTGEKPYACPECGKAFNQRSNLSRHQRTHSSAKPY-------------------- 419

  Fly   462 EDNDTKGDIAGTGGGYHDEDSQGTPDGSGGMHYPSYFKDGKGQKILPEVLQHIGVRPANMPLYVR 526
                                                                            .
Human   420 ----------------------------------------------------------------A 420

  Fly   527 CPICDKEFKQKTTLLQHGCIHIESRPYPCPECGKRFRQQSHLTQHLRIHTNEKPFGCMYCPRFFR 591
            ||:|:|.||.::.|:||...|...|||.|.||||.||..|.|.||.|:|:.|||:.|..|.:.|.
Human   421 CPLCEKAFKGRSGLVQHQRAHTGERPYGCSECGKTFRGCSELRQHERLHSGEKPYICRDCGKAFV 485

  Fly   592 QRTILNQHLRIHTGEKPYKCGQCGKDFRQKAILDQHTRTHQG 633
            :...|.:|||.||||:||.||.||:.|.|::.|::|.:.|.|
Human   486 RNCSLVRHLRTHTGERPYACGDCGRAFSQRSNLNEHRKRHGG 527

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
jimNP_001262221.1 C2H2 Zn finger 331..351 CDD:275368 11/19 (58%)
COG5048 355..666 CDD:227381 94/315 (30%)
C2H2 Zn finger 359..379 CDD:275368 9/19 (47%)
C2H2 Zn finger 387..407 CDD:275368 6/19 (32%)
C2H2 Zn finger 415..435 CDD:275368 11/19 (58%)
C2H2 Zn finger 527..547 CDD:275368 9/19 (47%)
C2H2 Zn finger 555..575 CDD:275368 12/19 (63%)
C2H2 Zn finger 583..603 CDD:275368 7/19 (37%)
C2H2 Zn finger 611..631 CDD:275368 8/19 (42%)
C2H2 Zn finger 639..661 CDD:275368
ZNF837NP_612475.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..101 30/131 (23%)
PRK07003 <3..>265 CDD:235906 73/344 (21%)
zf-C2H2 271..293 CDD:395048 11/21 (52%)
C2H2 Zn finger 273..293 CDD:275368 11/19 (58%)
zf-H2C2_2 285..310 CDD:463886 16/24 (67%)
COG5048 <361..521 CDD:227381 77/243 (32%)
C2H2 Zn finger 365..385 CDD:275368 6/19 (32%)
C2H2 Zn finger 393..413 CDD:275368 11/19 (58%)
C2H2 Zn finger 421..441 CDD:275368 9/19 (47%)
C2H2 Zn finger 449..469 CDD:275368 12/19 (63%)
C2H2 Zn finger 477..497 CDD:275368 7/19 (37%)
C2H2 Zn finger 505..525 CDD:275368 8/19 (42%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.