DRSC/TRiP Functional Genomics Resources

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Protein Alignment jim and LOC110439432

DIOPT Version :10

Sequence 1:NP_001262221.1 Gene:jim / 43924 FlyBaseID:FBgn0027339 Length:938 Species:Drosophila melanogaster
Sequence 2:NP_001428718.1 Gene:LOC110439432 / 110439432 -ID:- Length:360 Species:Danio rerio


Alignment Length:337 Identity:125/337 - (37%)
Similarity:165/337 - (48%) Gaps:58/337 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   325 DLRLFKCLTCGKDFKQKSTLLQHDRIHTDARPFPCSECGKRFRQQSHLTQHLRIHANEKPFTCPY 389
            |...|.|...||.|..||.|..|...||..:||.|::|||.|.|.|.|.:|:|||..||||||..
Zfish    62 DENCFSCTQYGKSFASKSKLKIHMNNHTRDKPFTCTQCGKSFSQSSSLNRHMRIHTGEKPFTCTQ 126

  Fly   390 CSRSFRQRAILNQHIRIHSGEKPFACPECGKHFRQKAILNQHVRTHQDVSPHLIFKNGPHPTLWP 454
            |.:||.|.:.||||:.||:|||||.|.:|||.|::.:.|.:|.|.|                  .
Zfish   127 CGKSFSQSSHLNQHMMIHTGEKPFTCSQCGKSFKRLSYLIEHTRIH------------------T 173

  Fly   455 SDVPFPGEDNDTKGDIAGTGGGYHDEDSQGTPDGSGGMHYPSYFKDGKGQKILPEVLQHIGVRPA 519
            .:.||                         |....|..:|.|           ..::|||.:...
Zfish   174 GEKPF-------------------------TCSQCGKSYYCS-----------SHLIQHIRIHTG 202

  Fly   520 NMPLYVRCPICDKEFKQKTTLLQHGCIHIESRPYPCPECGKRFRQQSHLTQHLRIHTNEKPFGCM 584
            ..|.  .|..|.|.|.:.::..||..||...:|:.|.:|.|.|...:||.||:||||.||||.|.
Zfish   203 EKPF--TCTQCGKSFSRSSSFNQHMRIHTGEKPFTCTQCRKTFNCSTHLIQHMRIHTGEKPFTCT 265

  Fly   585 YCPRFFRQRTILNQHLRIHTGEKPYKCGQCGKDFRQKAILDQHTRTHQGDRPFCCPMPNCRRRFA 649
            .|.:.|.:.:.||||||||||:||:.|.||||.|.|.:.|:.|.|.|.|::||.|  ..|.:...
Zfish   266 QCGKSFNRLSHLNQHLRIHTGQKPFTCIQCGKSFSQSSSLNLHMRIHTGEKPFTC--TQCGKSVN 328

  Fly   650 TENEVTKHIDNH 661
            ..:.:.||:..|
Zfish   329 RSSNLNKHMKIH 340

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
jimNP_001262221.1 C2H2 Zn finger 331..351 CDD:275368 8/19 (42%)
COG5048 355..666 CDD:227381 113/307 (37%)
C2H2 Zn finger 359..379 CDD:275368 10/19 (53%)
C2H2 Zn finger 387..407 CDD:275368 9/19 (47%)
C2H2 Zn finger 415..435 CDD:275368 8/19 (42%)
C2H2 Zn finger 527..547 CDD:275368 6/19 (32%)
C2H2 Zn finger 555..575 CDD:275368 9/19 (47%)
C2H2 Zn finger 583..603 CDD:275368 9/19 (47%)
C2H2 Zn finger 611..631 CDD:275368 10/19 (53%)
C2H2 Zn finger 639..661 CDD:275368 4/21 (19%)
LOC110439432NP_001428718.1 None

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