DRSC/TRiP Functional Genomics Resources

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Protein Alignment jim and ZNF460

DIOPT Version :10

Sequence 1:NP_001262221.1 Gene:jim / 43924 FlyBaseID:FBgn0027339 Length:938 Species:Drosophila melanogaster
Sequence 2:NP_006626.3 Gene:ZNF460 / 10794 HGNCID:21628 Length:562 Species:Homo sapiens


Alignment Length:415 Identity:122/415 - (29%)
Similarity:184/415 - (44%) Gaps:71/415 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   329 FKCLTCGKDFKQKSTLLQHDRIHTDARPFPCSECGKRFRQQSHLTQHLRIHANEKPFTCPYCSRS 393
            :.|..|||.|.:...||||..|||..:|:.|.||||.|.::||||:|.|.|..:|||.|..|.|:
Human   196 YDCPECGKAFGKSKHLLQHHIIHTGEKPYKCLECGKDFNRRSHLTRHQRTHNGDKPFVCSECGRT 260

  Fly   394 FRQRAILNQHIRIHSGEKPFACPECGKHFRQKAILNQHVRTHQDVSPHLIFKNGPHPTLWPSDVP 458
            |.:.:.|.:|.|:|||||||.|.||||.|..::....|.::|.:..|..                
Human   261 FNRGSHLTRHQRVHSGEKPFVCNECGKAFTYRSNFVLHNKSHNEKKPFA---------------- 309

  Fly   459 FPGEDNDTKGDIAGTGGGYHDEDSQGTPDGSGGMHYPSYFKDGKGQKILPEVLQHIGVRPANMPL 523
                       .:..|.|:::..:                       ::...:.|.|.||     
Human   310 -----------CSECGKGFYESTA-----------------------LIQHFIIHTGERP----- 335

  Fly   524 YVRCPICDKEFKQKTTLLQHGCIHIESRPYPCPECGKRFRQQSHLTQHLRIHTNEKPFGCMYCPR 588
             .:|..|.|.|..::.|.||..||...:|:.|.:|||.|...|....|.|.||.||||.|..|.:
Human   336 -FKCLECGKAFNCRSHLKQHERIHTGEKPFVCSQCGKAFTHYSTYVLHERAHTGEKPFECKECGK 399

  Fly   589 FFRQRTILNQHLRIHTGEKPYKCGQCGKDFRQKAILDQHTRTHQGDRPFCCPMPNCRRRFATENE 653
            .|..|..|.:|..||||||||:|.||||.|.:.:.|.:|...|.|::|:.|  ..|.:.|.....
Human   400 AFSIRKDLIRHFNIHTGEKPYECLQCGKAFTRMSGLTRHQWIHTGEKPYVC--IQCGKAFCRTTN 462

  Fly   654 VTKHIDNHMNPNTTKV--------RRQQQQQHQQQQQQQQQQQQQQQQQNNNAVAQVANH--LMN 708
            :.:|...|......:.        ||....:||:....::..:..|....:.....:..|  :..
Human   463 LIRHFSIHTGEKPYECVECGKAFNRRSPLTRHQRIHTAEKSHEPIQSGNVSCESTDLIQHSIIHT 527

  Fly   709 DAKSLAAQQFLNNNNPSAVDNKANI 733
            ::..::|   :|...||...:.:::
Human   528 ESSPVSA---VNMETPSIAAHSSSL 549

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
jimNP_001262221.1 C2H2 Zn finger 331..351 CDD:275368 9/19 (47%)
COG5048 355..666 CDD:227381 100/310 (32%)
C2H2 Zn finger 359..379 CDD:275368 12/19 (63%)
C2H2 Zn finger 387..407 CDD:275368 7/19 (37%)
C2H2 Zn finger 415..435 CDD:275368 7/19 (37%)
C2H2 Zn finger 527..547 CDD:275368 7/19 (37%)
C2H2 Zn finger 555..575 CDD:275368 8/19 (42%)
C2H2 Zn finger 583..603 CDD:275368 6/19 (32%)
C2H2 Zn finger 611..631 CDD:275368 8/19 (42%)
C2H2 Zn finger 639..661 CDD:275368 4/21 (19%)
ZNF460NP_006626.3 KRAB 13..79 CDD:214630
C2H2 Zn finger 198..218 CDD:275368 9/19 (47%)
COG5048 222..552 CDD:227381 110/389 (28%)
C2H2 Zn finger 226..246 CDD:275368 12/19 (63%)
C2H2 Zn finger 254..274 CDD:275368 7/19 (37%)
C2H2 Zn finger 282..302 CDD:275368 7/19 (37%)
C2H2 Zn finger 310..330 CDD:275368 2/42 (5%)
C2H2 Zn finger 338..358 CDD:275368 7/19 (37%)
C2H2 Zn finger 366..386 CDD:275368 8/19 (42%)
C2H2 Zn finger 394..414 CDD:275368 6/19 (32%)
C2H2 Zn finger 422..442 CDD:275368 8/19 (42%)
C2H2 Zn finger 450..470 CDD:275368 4/21 (19%)
C2H2 Zn finger 478..498 CDD:275368 4/19 (21%)
C2H2 Zn finger 506..526 CDD:275368 2/19 (11%)
Blue background indicates that the domain is not in the aligned region.

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