DRSC/TRiP Functional Genomics Resources

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Protein Alignment jim and Zfp664

DIOPT Version :10

Sequence 1:NP_001262221.1 Gene:jim / 43924 FlyBaseID:FBgn0027339 Length:938 Species:Drosophila melanogaster
Sequence 2:NP_001403751.1 Gene:Zfp664 / 102556092 RGDID:7677226 Length:261 Species:Rattus norvegicus


Alignment Length:309 Identity:102/309 - (33%)
Similarity:140/309 - (45%) Gaps:58/309 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   328 LFKCLTCGKDFKQKSTLLQHDRIHTDARPFPCSECGKRFRQQSHLTQHLRIHANEKPFTCPYCSR 392
            ::||..|.:.|.:::.|..|.:|||..:|..|.:|.|.|...|.|..|.|.|..||.:.|..|.:
  Rat     2 IYKCPMCREFFSERADLFMHQKIHTAEKPHKCDKCDKGFFHISELHIHWRDHTGEKVYKCDDCGK 66

  Fly   393 SFRQRAILNQHIRIHSGEKPFACPECGKHFRQKAILNQHVRTHQDVSPHLIFKNGPHPTLWPSDV 457
            .|.....||:|.:||:.|||:.|.||||.|...:.|..|:|.|....|::.              
  Rat    67 DFSTTTKLNRHKKIHTVEKPYKCYECGKAFNWSSHLQIHMRVHTGEKPYVC-------------- 117

  Fly   458 PFPGEDNDTKGDIAGTGGGYHDEDSQGTPDGSG-GMHYPSYFKDGKGQKILPEVLQHIGVRPANM 521
                                 .|..:|..:.|. .||          |::      |.|.:|   
  Rat   118 ---------------------SECGRGFSNSSNLCMH----------QRV------HTGEKP--- 142

  Fly   522 PLYVRCPICDKEFKQKTTLLQHGCIHIESRPYPCPECGKRFRQQSHLTQHLRIHTNEKPFGCMYC 586
               .:|..|.|.|:..::|..|..:|...:||.|.||||.|.|.|.|..|.|:||.|||:.|..|
  Rat   143 ---FKCEECGKAFRHTSSLCMHQRVHTGEKPYKCYECGKAFSQSSSLCIHQRVHTGEKPYRCCGC 204

  Fly   587 PRFFRQRTILNQHLRIHTGEKPYKCGQCGKDFRQKAILDQHTRTHQGDR 635
            .:.|.|.:.|..|.|:||||||:||.:|||.|.|...|..|.|.|..:|
  Rat   205 GKAFSQSSSLCIHQRVHTGEKPFKCDECGKAFSQSTSLCIHQRVHTKER 253

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
jimNP_001262221.1 C2H2 Zn finger 331..351 CDD:275368 5/19 (26%)
COG5048 355..666 CDD:227381 93/282 (33%)
C2H2 Zn finger 359..379 CDD:275368 8/19 (42%)
C2H2 Zn finger 387..407 CDD:275368 6/19 (32%)
C2H2 Zn finger 415..435 CDD:275368 9/19 (47%)
C2H2 Zn finger 527..547 CDD:275368 6/19 (32%)
C2H2 Zn finger 555..575 CDD:275368 11/19 (58%)
C2H2 Zn finger 583..603 CDD:275368 7/19 (37%)
C2H2 Zn finger 611..631 CDD:275368 9/19 (47%)
C2H2 Zn finger 639..661 CDD:275368
Zfp664NP_001403751.1 C2H2 Zn finger 5..25 CDD:275368 5/19 (26%)
C2H2 Zn finger 33..53 CDD:275368 8/19 (42%)
C2H2 Zn finger 61..81 CDD:275368 6/19 (32%)
zf-H2C2_2 74..97 CDD:463886 13/22 (59%)
C2H2 Zn finger 89..109 CDD:275368 9/19 (47%)
COG5048 <94..256 CDD:227381 66/217 (30%)
C2H2 Zn finger 117..137 CDD:275368 6/70 (9%)
C2H2 Zn finger 145..165 CDD:275368 6/19 (32%)
C2H2 Zn finger 173..193 CDD:275368 11/19 (58%)
C2H2 Zn finger 201..221 CDD:275368 7/19 (37%)
C2H2 Zn finger 229..249 CDD:275368 9/19 (47%)
Blue background indicates that the domain is not in the aligned region.

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