DRSC/TRiP Functional Genomics Resources

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Protein Alignment jim and Zfp958

DIOPT Version :10

Sequence 1:NP_001262221.1 Gene:jim / 43924 FlyBaseID:FBgn0027339 Length:938 Species:Drosophila melanogaster
Sequence 2:NP_001406248.1 Gene:Zfp958 / 100302405 RGDID:2311392 Length:495 Species:Rattus norvegicus


Alignment Length:346 Identity:113/346 - (32%)
Similarity:161/346 - (46%) Gaps:59/346 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   316 RPHKNKPHSDLRLFKCLTCGKDFKQKSTLLQHDRIHTDARPFPCSECGKRFRQQSHLTQHLRIHA 380
            |.|: :.|:..:|:||:.|||.|..::||.:|.|.|::.:|..|::|||.|...|.|.:|.|.|.
  Rat   119 RIHE-RTHTGEKLYKCIQCGKAFSDQNTLQRHKRTHSEEKPCKCNQCGKAFAHHSSLRKHERTHT 182

  Fly   381 NEKPFTCPYCSRSFRQRAILNQHIRIHSGEKPFACPECGKHFRQKAILNQHVRTHQDVSPHLIFK 445
            .|||:.|..|.::|...:.|.:|.|.|:||||:.|.:|.|.|...:.|.:|.|||....|:    
  Rat   183 GEKPYGCNQCDKAFACHSSLRRHERTHTGEKPYECNQCDKAFAYHSSLQKHERTHTGEKPY---- 243

  Fly   446 NGPHPTLWPSDVPFPGEDNDTKGDIAGTGGGYHDEDSQGTPDGSGGMHYPSYFKDGKGQKILPEV 510
                                          |.:..|.......|...|..:              
  Rat   244 ------------------------------GCNQCDKAFACHSSLRKHERT-------------- 264

  Fly   511 LQHIGVRPANMPLYVRCPICDKEFKQKTTLLQHGCIHIESRPYPCPECGKRFRQQSHLTQHLRIH 575
              |.|.:|      ..|..|.|.|...:||.:|..||...:||.|.:|||.|..|:.|..|.|.|
  Rat   265 --HTGEKP------YECNQCGKAFACHSTLRKHERIHTGEKPYECNQCGKAFSMQNTLRVHERTH 321

  Fly   576 TNEKPFGCMYCPRFFRQRTILNQHLRIHTGEKPYKCGQCGKDFRQKAILDQHTRTHQGDRPFCCP 640
            |.||||.|..|.:.|:..:.|..|.|:||||||::|.||||.|...:...:|.|.|.|::|:.| 
  Rat   322 TGEKPFECNQCGKTFKLHSQLRIHKRVHTGEKPHECDQCGKTFACPSSFQKHKRVHSGEKPYGC- 385

  Fly   641 MPNCRRRFATENEVTKHIDNH 661
             ..|.:.||..:.:.||...|
  Rat   386 -NQCDKAFAIHSRLRKHERTH 405

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
jimNP_001262221.1 C2H2 Zn finger 331..351 CDD:275368 9/19 (47%)
COG5048 355..666 CDD:227381 98/307 (32%)
C2H2 Zn finger 359..379 CDD:275368 9/19 (47%)
C2H2 Zn finger 387..407 CDD:275368 6/19 (32%)
C2H2 Zn finger 415..435 CDD:275368 7/19 (37%)
C2H2 Zn finger 527..547 CDD:275368 7/19 (37%)
C2H2 Zn finger 555..575 CDD:275368 9/19 (47%)
C2H2 Zn finger 583..603 CDD:275368 6/19 (32%)
C2H2 Zn finger 611..631 CDD:275368 8/19 (42%)
C2H2 Zn finger 639..661 CDD:275368 6/21 (29%)
Zfp958NP_001406248.1 C2H2 Zn finger 133..153 CDD:275368 9/19 (47%)
C2H2 Zn finger 161..181 CDD:275368 9/19 (47%)
C2H2 Zn finger 189..209 CDD:275368 6/19 (32%)
C2H2 Zn finger 217..237 CDD:275368 7/19 (37%)
C2H2 Zn finger 245..265 CDD:275368 3/35 (9%)
C2H2 Zn finger 273..293 CDD:275368 7/19 (37%)
C2H2 Zn finger 301..321 CDD:275368 9/19 (47%)
C2H2 Zn finger 329..349 CDD:275368 6/19 (32%)
C2H2 Zn finger 357..377 CDD:275368 8/19 (42%)
C2H2 Zn finger 385..405 CDD:275368 6/21 (29%)
C2H2 Zn finger 413..433 CDD:275368
C2H2 Zn finger 441..461 CDD:275368
C2H2 Zn finger 469..489 CDD:275368
KRAB 4..44 CDD:460171
C2H2 Zn finger 80..97 CDD:275368
C2H2 Zn finger 105..125 CDD:275368 2/6 (33%)
COG5048 129..490 CDD:227381 110/335 (33%)
Blue background indicates that the domain is not in the aligned region.

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