DRSC/TRiP Functional Genomics Resources

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Protein Alignment jim and Zfp958

DIOPT Version :9

Sequence 1:NP_001262221.1 Gene:jim / 43924 FlyBaseID:FBgn0027339 Length:938 Species:Drosophila melanogaster
Sequence 2:XP_038944925.1 Gene:Zfp958 / 100302405 RGDID:2311392 Length:495 Species:Rattus norvegicus


Alignment Length:346 Identity:113/346 - (32%)
Similarity:161/346 - (46%) Gaps:59/346 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   316 RPHKNKPHSDLRLFKCLTCGKDFKQKSTLLQHDRIHTDARPFPCSECGKRFRQQSHLTQHLRIHA 380
            |.|: :.|:..:|:||:.|||.|..::||.:|.|.|::.:|..|::|||.|...|.|.:|.|.|.
  Rat   119 RIHE-RTHTGEKLYKCIQCGKAFSDQNTLQRHKRTHSEEKPCKCNQCGKAFAHHSSLRKHERTHT 182

  Fly   381 NEKPFTCPYCSRSFRQRAILNQHIRIHSGEKPFACPECGKHFRQKAILNQHVRTHQDVSPHLIFK 445
            .|||:.|..|.::|...:.|.:|.|.|:||||:.|.:|.|.|...:.|.:|.|||....|:    
  Rat   183 GEKPYGCNQCDKAFACHSSLRRHERTHTGEKPYECNQCDKAFAYHSSLQKHERTHTGEKPY---- 243

  Fly   446 NGPHPTLWPSDVPFPGEDNDTKGDIAGTGGGYHDEDSQGTPDGSGGMHYPSYFKDGKGQKILPEV 510
                                          |.:..|.......|...|..:              
  Rat   244 ------------------------------GCNQCDKAFACHSSLRKHERT-------------- 264

  Fly   511 LQHIGVRPANMPLYVRCPICDKEFKQKTTLLQHGCIHIESRPYPCPECGKRFRQQSHLTQHLRIH 575
              |.|.:|      ..|..|.|.|...:||.:|..||...:||.|.:|||.|..|:.|..|.|.|
  Rat   265 --HTGEKP------YECNQCGKAFACHSTLRKHERIHTGEKPYECNQCGKAFSMQNTLRVHERTH 321

  Fly   576 TNEKPFGCMYCPRFFRQRTILNQHLRIHTGEKPYKCGQCGKDFRQKAILDQHTRTHQGDRPFCCP 640
            |.||||.|..|.:.|:..:.|..|.|:||||||::|.||||.|...:...:|.|.|.|::|:.| 
  Rat   322 TGEKPFECNQCGKTFKLHSQLRIHKRVHTGEKPHECDQCGKTFACPSSFQKHKRVHSGEKPYGC- 385

  Fly   641 MPNCRRRFATENEVTKHIDNH 661
             ..|.:.||..:.:.||...|
  Rat   386 -NQCDKAFAIHSRLRKHERTH 405

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
jimNP_001262221.1 C2H2 Zn finger 331..351 CDD:275368 9/19 (47%)
COG5048 355..666 CDD:227381 98/307 (32%)
zf-C2H2 357..379 CDD:278523 9/21 (43%)
C2H2 Zn finger 359..379 CDD:275368 9/19 (47%)
zf-H2C2_2 371..396 CDD:290200 10/24 (42%)
C2H2 Zn finger 387..407 CDD:275368 6/19 (32%)
zf-H2C2_2 400..424 CDD:290200 12/23 (52%)
C2H2 Zn finger 415..435 CDD:275368 7/19 (37%)
C2H2 Zn finger 527..547 CDD:275368 7/19 (37%)
zf-C2H2 553..575 CDD:278523 10/21 (48%)
C2H2 Zn finger 555..575 CDD:275368 9/19 (47%)
C2H2 Zn finger 583..603 CDD:275368 6/19 (32%)
zf-H2C2_2 596..620 CDD:290200 15/23 (65%)
C2H2 Zn finger 611..631 CDD:275368 8/19 (42%)
zf-H2C2_2 624..650 CDD:290200 8/25 (32%)
C2H2 Zn finger 639..661 CDD:275368 6/21 (29%)
Zfp958XP_038944925.1 KRAB 4..44 CDD:396083
C2H2 Zn finger 80..97 CDD:275368
C2H2 Zn finger 105..125 CDD:275368 2/6 (33%)
COG5048 129..490 CDD:227381 110/335 (33%)
C2H2 Zn finger 133..153 CDD:275368 9/19 (47%)
C2H2 Zn finger 161..181 CDD:275368 9/19 (47%)
C2H2 Zn finger 189..209 CDD:275368 6/19 (32%)
C2H2 Zn finger 217..237 CDD:275368 7/19 (37%)
C2H2 Zn finger 245..265 CDD:275368 3/35 (9%)
C2H2 Zn finger 273..293 CDD:275368 7/19 (37%)
C2H2 Zn finger 301..321 CDD:275368 9/19 (47%)
C2H2 Zn finger 329..349 CDD:275368 6/19 (32%)
C2H2 Zn finger 357..377 CDD:275368 8/19 (42%)
C2H2 Zn finger 385..405 CDD:275368 6/21 (29%)
C2H2 Zn finger 413..433 CDD:275368
C2H2 Zn finger 441..461 CDD:275368
C2H2 Zn finger 469..489 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24384
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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