DRSC/TRiP Functional Genomics Resources

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Protein Alignment axo and cntnap5a

DIOPT Version :9

Sequence 1:NP_001246631.1 Gene:axo / 43923 FlyBaseID:FBgn0262870 Length:2179 Species:Drosophila melanogaster
Sequence 2:XP_009302955.1 Gene:cntnap5a / 569185 ZFINID:ZDB-GENE-081105-126 Length:1306 Species:Danio rerio


Alignment Length:1233 Identity:269/1233 - (21%)
Similarity:470/1233 - (38%) Gaps:216/1233 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   484 ITLRGASYVSY---------RIYDWKDRVHSSTRR-ISLMFRTNFDDSALFYASGESLKHQYIAA 538
            :.:.|.:|.||         .:|.:..:..|:.:. |||.|::...:..|.:  ||..:..||..
Zfish   171 VAVYGCAYRSYVADFDGRSSLLYRFNQKSMSTVKDVISLRFKSRQAEGVLLH--GEGQRGDYITL 233

  Fly   539 SIKNQSVHVEMDFGDN----------VMSTVLTDDLTRGYWHNLTILHEQRTVSIILDQQQKVLE 593
            .:....:.:.::..|:          |....|.|||   :||::.|....:.|:..||:..:  .
Zfish   234 ELHRGRLALHLNLDDSRVRSSSARMVVTLGSLLDDL---HWHSVLIERFNKQVNFTLDRHTQ--H 293

  Fly   594 LPATASGNML-FDPEIYFGGGPELHKKKGLASHNNFVGSLKYVYYNDISILYELQRGNPKVHYHG 657
            ......|:.| .|.|:.|||.| |..|.|.....||.|.::.:|||.::|:...:|..|:::..|
Zfish   294 FRTKGDGDSLEVDYELSFGGIP-LPGKPGTFIRRNFHGCMENLYYNGVNIIDLAKRRKPQIYSVG 357

  Fly   658 VLEAEFVENEVNVIPITYPFATS---HIWWPINHAEEFNIKFDFRSSRPGAVLAYSDVTTSAGNG 719
              ...|..:|..::..|:..::|   .:..|....|..:::..||:..|..:|..|.:.::..:.
Zfish   358 --NVTFSCSEPQLVATTFQSSSSSFLSLPAPAPVLEGLSVRLQFRTWNPDGLLLSSPLISAQDSC 420

  Fly   720 FWEIRLTSDKLSFDLVPDVNNNVTHSTT-IKINRATS--------WHSVELDYKLGEIRFTVDYR 775
            :..::::|.:|          ::||.|: :|::..::        ||||.|..:..::..|:|..
Zfish   421 YLILKISSGRL----------HLTHQTSALKMSEVSAGQRVNDGLWHSVSLSARGLQMTMTLDNE 475

  Fly   776 HTLSQMYGLTFNIGDKLIIG--------SSLKSAAMGLVGCIRDIEINGHLIEPRHVVKTER--- 829
            ...|..........||...|        ||..:..|...||:|.|.||.   :|..::..::   
Zfish   476 PASSIHLKNYLEAKDKQYFGGCPVSQNDSSCLNPTMAFQGCVRLILINN---QPVDLLSVQQGHL 537

  Fly   830 -VVGEVALDNCNYIDPCKRPNTCEHGGKCFVKDDRVTCDCKHTGYIGKNCHFTKYRKTCEELALL 893
             ...::..|.|...|.|.. |.||||.:|.......:|||..|||.|..||.:.|..:||...|.
Zfish   538 GSYNQLQFDLCGIRDRCLY-NFCEHGSRCSQTWSSFSCDCSGTGYSGATCHNSVYEASCEHYRLA 601

  Fly   894 GFTKSDVYLIDIDGNGVFPPAHVKCDFQSLENATKTIVEHNLPSQVDVRSARESD-----FSFNI 953
            | :.|..:.||.||:|...|..|.|:...  |...|:|.||..:.|.|:.:....     |::: 
Zfish   602 G-SSSGYFSIDPDGSGPLDPIQVYCNITG--NKVWTVVRHNSSNPVRVQGSSLQKPHVEWFNYS- 662

  Fly   954 RYREFSPHMLQELISHSLYCTQYIKYDCYRAQL-----ELHSATWFTSSAKNLTVDFLGNVKRGA 1013
                .|...|:.|:|.|.:|.|.|.|.|.:::|     ....:.|.....:..|  :.|..:.|.
Zfish   663 ----SSSDQLKALLSLSEHCEQRISYHCRKSRLFNPWDGTPLSWWVDRRGEKRT--YWGGFQPGV 721

  Fly  1014 --CPCSVNKTCVDPNQSCNCDVKENKWNSDEGYYQDPQSLGITNMYFLQQKDMDDEAQGRITLGP 1076
              |.|.:.::|.|.|..||||.....|.:|.|.....:.|.:..:.......:..||.  ..:||
Zfish   722 QQCSCGLEESCADMNYFCNCDADRVSWENDTGVLSYKEHLPVREIVIGDTYRLGSEAM--YVVGP 784

  Fly  1077 LECVETNTQKYVVTFTTSQSYIEVPGWRKG---DIAFSFRTTGEKAILLFQPPIRPHYPSFMVAL 1138
            |:|....:....|:|..:.||::....:..   |::|.|:|.....:.|....:   :....|.|
Zfish   785 LQCSGDKSLWNAVSFYQAASYLQFASLQAELSLDVSFFFKTASPSGVFLENIGL---HDFIRVEL 846

  Fly  1139 TGDDQLTFTFTLSTGTTRELVINSHRRLNGGEWHKIWIDYNQYHVRFMINTDYQMLDLLPEEEFG 1203
            :....:||:|.:..|.. .|.:.|...||..:||  |:...:......:..|...|.::.....|
Zfish   847 SSPTAVTFSFNVGDGPV-VLTVKSPVPLNDRQWH--WVRAERNVKEACLQVDQLPLRIIETPPDG 908

  Fly  1204 PFE----GSMYIGGATFDLLKKLSVKAGLIGCFRGLVVNGEILDIYSYMSVHLSEIIKDCKPSCV 1264
            ...    ..:::||..       :.:.|.:||.|...:||...|:.....| ...:...|...|.
Zfish   909 HLRLQLGNQLFVGGTA-------TRQRGFLGCIRAFNMNGVNFDLEERAKV-TPGVSSGCAGHCS 965

  Fly  1265 PSP--CRNGAQCKELWSSFKCVCNNPWAHIGEFCETNINEK-----ALTFINRESFLMRNYLSVG 1322
            .|.  |.|..:|.|..|.:.|.|.|. |:.|..|...::..     ::|:|.:|.|.:....|..
Zfish   966 SSAGLCHNRGKCVEKSSGYMCDCTNS-AYGGPSCTEEVSMSFERGASVTYIFQEPFSVIQNRSAA 1029

  Fly  1323 ATPVILMHGINGERDVLKGILNQDLLINLRTYDTNALVLYANDHYNNFVHLYISLNREIVFLYNY 1387
            ...|...:  :..||        ::.::.:|..:.|::|..|.....:|.:.::.|..:...|..
Zfish  1030 VLSVPSQY--SKSRD--------NMALSFQTTQSPAMLLTVNTLSQQYVAVILARNGSLQIWYQL 1084

  Fly  1388 GDEIVNLTLLDDTLMASLKSIQVAIVRGEQETRMHVNEHS----VSIDRG----TLLLDEYANKP 1444
            ..|     ...|.....|.|:....:.     |:|:....    |.:||.    ||..|...|..
Zfish  1085 HKE-----KRPDVFSPILSSLADGRLH-----RVHIQREGKDVFVQVDRENKKYTLSFDAKFNSM 1139

  Fly  1445 WSNPEKEVLSPHRPPAPPTEYFQFHVGGYDPANLLRPNVDAPALEGYIGCVRGLKIGAQLIDLAD 1509
            .|                     ..:|.....:|:...|.....:|::||            .:.
Zfish  1140 KS---------------------LTLGKVTGRDLMDDEVAHAGSKGFVGC------------FSS 1171

  Fly  1510 INERNIAPTQEGVLPNCQIKCDAEPCKNGGTCQEHFAEQLSTCDCEHTSFLGEFCS-----EEKG 1569
            :...::||.:..:|             |.|:........|...:|...:.|....|     ||.|
Zfish  1172 VQFNHVAPLKAALL-------------NRGSSLVSIRGNLLESNCGALADLSTSVSRLDHGEEVG 1223

  Fly  1570 ADFSGESTLQRKFELPGTGRVDYVRLQLAFSS-----------FDLRRANRIMLLMQTEAERS 1621
            .|........:    |.:..:..|.....||:           :..|:|.|...|.:.|.:||
Zfish  1224 KDNKHHEDASQ----PDSAVIGGVVTAAVFSTVCVLAVMLRFLYQHRQAQRTASLQEKEHQRS 1282

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
axoNP_001246631.1 KU 119..171 CDD:238057
Laminin_G_2 275..411 CDD:280389
EGF_CA 433..476 CDD:238011
Laminin_G_2 514..640 CDD:280389 35/136 (26%)
Laminin_G_2 698..817 CDD:280389 31/135 (23%)
EGF_CA 842..878 CDD:238011 15/35 (43%)
Laminin_G_2 1112..1240 CDD:280389 26/131 (20%)
EGF_CA 1256..1297 CDD:238011 13/42 (31%)
Laminin_G_2 1351..1503 CDD:280389 27/159 (17%)
LamG 1612..1733 CDD:304605 4/10 (40%)
cntnap5aXP_009302955.1 FA58C 54..176 CDD:214572 0/4 (0%)
FA58C 54..175 CDD:238014 0/3 (0%)
LamG 182..338 CDD:238058 38/163 (23%)
Laminin_G_2 399..525 CDD:280389 31/138 (22%)
EGF_CA 552..586 CDD:238011 15/34 (44%)
COLFI 605..>689 CDD:295304 27/90 (30%)
LamG 804..940 CDD:238058 29/148 (20%)
EGF_2 964..998 CDD:285248 12/34 (35%)
Laminin_G_2 1048..1177 CDD:280389 27/171 (16%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D171014at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.010

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