DRSC/TRiP Functional Genomics Resources

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Protein Alignment axo and APLP2

DIOPT Version :9

Sequence 1:NP_001246631.1 Gene:axo / 43923 FlyBaseID:FBgn0262870 Length:2179 Species:Drosophila melanogaster
Sequence 2:NP_001633.1 Gene:APLP2 / 334 HGNCID:598 Length:763 Species:Homo sapiens


Alignment Length:452 Identity:90/452 - (19%)
Similarity:144/452 - (31%) Gaps:148/452 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    90 GTGGGGSNSGISGNNSAMIQGQKSNQYEKCAGPGDPGPCKQYIYKWRYEPTTNECTNFIWGGCEG 154
            |:.|..|:..|:.:..|:           |:.....|||:..:.:|.::.:..:|..||:|||.|
Human   292 GSDGTMSDKEITHDVKAV-----------CSQEAMTGPCRAVMPRWYFDLSKGKCVRFIYGGCGG 345

  Fly   155 NPQNRFGTEAECLFHCIGGPHTLPPFLQSTTREPSTTESSMLLGLPYTQSPAQSPDGMGGAEGGD 219
            | :|.|.:|..|:..|   ...:||       .|..|....:    |.::   |.|....|....
Human   346 N-RNNFESEDYCMAVC---KAMIPP-------TPLPTNDVDV----YFET---SADDNEHARFQK 392

  Fly   220 GTTPVPIEQRG------PELTFAETGQGKTFIFAKNNTFIQMDGDII------------QTFQLR 266
            ....:.|..|.      .|...||. |.|....|:..|.||....::            |..:..
Human   393 AKEQLEIRHRNRMDRVKKEWEEAEL-QAKNLPKAERQTLIQHFQAMVKALEKEAASEKQQLVETH 456

  Fly   267 LCR-EISFQFRTRL---------------PHGLLV----YHNVKNPDRIN----------LDPYA 301
            |.| |.....|.|:               ||.:|.    |...:|.||::          :||..
Human   457 LARVEAMLNDRRRMALENYLAALQSDPPRPHRILQALRRYVRAENKDRLHTIRHYQHVLAVDPEK 521

  Fly   302 -----------LYVIVEKGQ------LKVVHV---------------------FGKHSTSVTVGE 328
                       |:||.|:..      .||.:|                     |....:...|..
Human   522 AAQMKSQVMTHLHVIEERRNQSLSLLYKVPYVAQEIQEEIDELLQEQRADMDQFTASISETPVDV 586

  Fly   329 SLNRDEWHSVMVRIDVHGARLIARVDNSQEEVYLKGLNHEYNYGVSTNLPSVVLVGG-------- 385
            .::.:|...:......|....:...:::|.|:|     |....|.........|:|.        
Human   587 RVSSEESEEIPPFHPFHPFPALPENEDTQPELY-----HPMKKGSGVGEQDGGLIGAEEKVINSK 646

  Fly   386 ------------------LSSEEKLHGVKYITESFVGCIRNVVLSSGKAASDLLPIAPLVAT 429
                              :.:.|::.|::...|| ||.:|.....|..|...||.||..:||
Human   647 NKVDENMVIDETLDVKEMIFNAERVGGLEEERES-VGPLREDFSLSSSALIGLLVIAVAIAT 707

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
axoNP_001246631.1 KU 119..171 CDD:238057 17/51 (33%)
Laminin_G_2 275..411 CDD:280389 36/228 (16%)
EGF_CA 433..476 CDD:238011
Laminin_G_2 514..640 CDD:280389
Laminin_G_2 698..817 CDD:280389
EGF_CA 842..878 CDD:238011
Laminin_G_2 1112..1240 CDD:280389
EGF_CA 1256..1297 CDD:238011
Laminin_G_2 1351..1503 CDD:280389
LamG 1612..1733 CDD:304605
APLP2NP_001633.1 A4_EXTRA 42..204 CDD:128326
GFLD subdomain. /evidence=ECO:0000255|PROSITE-ProRule:PRU01217 46..139
APP_N 49..147 CDD:280358
CuBD subdomain. /evidence=ECO:0000255|PROSITE-ProRule:PRU01217 147..205
APP_Cu_bd 149..204 CDD:289676
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 211..299 2/6 (33%)
Kunitz_BPTI 309..361 CDD:278443 18/66 (27%)
APP_E2 365..547 CDD:289677 38/196 (19%)
APP_amyloid 709..759 CDD:287486
Interaction with DAB2. /evidence=ECO:0000250 749..763
NPXY motif 750..755
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4295
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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