DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment axo and T22F7.3

DIOPT Version :9

Sequence 1:NP_001246631.1 Gene:axo / 43923 FlyBaseID:FBgn0262870 Length:2179 Species:Drosophila melanogaster
Sequence 2:NP_497207.4 Gene:T22F7.3 / 188757 WormBaseID:WBGene00020702 Length:1517 Species:Caenorhabditis elegans


Alignment Length:1264 Identity:228/1264 - (18%)
Similarity:366/1264 - (28%) Gaps:455/1264 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 ICSASGL------SLPNMTSTDAVVAGGGILPI--LVAGNPGNLGSSNMSLSGGGGLAGSST--- 66
            ||:::||      ::|:.|....|.....|.|.  |...:.||...:.:       ||..||   
 Worm   180 ICTSAGLCECPKETVPSRTRDGTVCISSAIPPACPLPEAHNGNPNPATV-------LANPSTHPL 237

  Fly    67 -GGQSLPDTGGGNSAGGSPAGGSSGT-----GGGGSNSGISGNNSAMIQGQKS----NQYEK--- 118
             .|..:|......|:....:.|..|:     ..|..:..|:...:.:...|.:    |:|.:   
 Worm   238 NPGNYMPVLCNSLSSEVRTSNGGDGSTWCVYPDGEQDVFIADTYNCISHPQVNNDLFNEYSEKVD 302

  Fly   119 ----------CAGPGDPGPCKQYIYKWRYEPTTNECTNFIWGGCEGNPQ-------NRFGTEAEC 166
                      |..|.:.|. :..:.:|.|...|..|..|:|     :|.       |.|.|...|
 Worm   303 GICCHNRAFVCIQPLESGD-EPSVPRWWYNSATGTCVQFMW-----DPDTITNASPNNFRTAEHC 361

  Fly   167 LFHC-----IGGPH----------TLP--PFLQSTTR---EPSTTESSMLLGLPYTQSPAQSPDG 211
            ..:|     .|.|.          .:|  ..|.||:|   |...|    |:|...|..|..|  .
 Worm   362 ESYCRDTCRRGAPEFASSKFSILDEVPRTNCLASTSRCDQEHQCT----LIGSQQTCCPTAS--H 420

  Fly   212 MGGAEGGDGTTPVPIE--QRGPELT--------FAETGQGKTFIFAKNNTFIQMDGDIIQTFQLR 266
            :..|.||......|.|  .||.::.        :.:..||:...|                    
 Worm   421 ICSANGGRMLLTKPPENYDRGLQIAGHKAVTRYYYDIDQGRCVNF-------------------- 465

  Fly   267 LCREISFQFRTRLPHGLLVYHNVKNPDRINLDPYALYVIVEKGQLKVVHVFGKHSTSVTVGESLN 331
                        |.|||..|:|...  :.:.:.:...::.|.|            ..:.:||   
 Worm   466 ------------LYHGLGNYNNFLT--KQDCESFCSKLVCENG------------NPLRIGE--- 501

  Fly   332 RDEWHSVMVRID------VHGARLIA------------RVDNSQEEVYLKGLNHEYNYGVSTNLP 378
              ||.......|      ..|:..:.            |:.:....|      ..|.|..:|...
 Worm   502 --EWQRCETNADCPSSHSCQGSHKVCCPTAQSLCTQPKRLGDCTSAV------RRYWYNAATRSC 558

  Fly   379 SVVLVGG-----------LSSEEKLHGVKYITESFVGCIRNVVLSSGKAASDLLPIAPLVATKHE 432
            .:....|           ::.::|..|:....:    |      ..|:|..|             
 Worm   559 EMFQYTGCQGNDNNFNTLMACQQKCRGIHVEPK----C------QHGRAFRD------------- 600

  Fly   433 NVNEGCSDMCESRHNLCFVGSRCINHYGGISCDCFGTHYEGEHCDIYTATIITLRG---ASYVSY 494
              ..|....|..:.|    |.:|..:|   .|...||.:.......:|.::...:|   .|..||
 Worm   601 --RNGNFQQCSDKQN----GPKCPVNY---VCSFDGTTHGCCPTKAFTCSLNPDKGVQCGSGRSY 656

  Fly   495 RIYDWKDRVHSSTRRISLMFR-TNFDDSALFYASGESLKHQYIAASIKNQSVHVEMDFGDNVMST 558
            |.|      .:|.::....|: ...|.:|..:.:.|..:|........|..:.:..:..:..|| 
 Worm   657 RYY------FNSNKQSCESFQYEGCDGNANNFLTSEDCQHYCGVGGCPNGGMPLRDEATNKPMS- 714

  Fly   559 VLTDDLTRGYWHN-LTILHEQRTVSIILDQQQKVLELPATASGNMLFDPEIYFGGGPELHKKKGL 622
             .::..:....|. |||.......|.....:|.:...| ...||               |..|  
 Worm   715 -CSEQKSCPSTHECLTIPVNGHVGSRCCPTKQHICSQP-PQQGN---------------HCSK-- 760

  Fly   623 ASHNNFVGSLKYVYYNDISILYELQRGNPKVHYHGVLEAEFVENEVNVIPITYPFATSHIWWPIN 687
            .|...|       |:|.::      |......|:|      ....:|      .|||.       
 Worm   761 ISVGRF-------YFNIVT------RECATFQYNG------CNGNLN------NFATQ------- 793

  Fly   688 HAEEFNIKFDFRSSRPGAV--LAYSDVTTSAGNGFWEIRLTSDKLSFDLVPDVNNNVTHSTTIKI 750
              .|.|   :|.||...||  :||.||.|              |.:||....:.|:...:...:.
 Worm   794 --SECN---NFCSSAGCAVGEVAYKDVNT--------------KKAFDCNNVLINSCPANFQCRF 839

  Fly   751 NRATSWH----SVELDYKLGEIRFTVDYRHTLSQMYGLTFNIGDKLIIGSSLKSAAMGLVG-CIR 810
            |..||.:    |..:|....|.|..::                   .:..:::..|:.:.| |..
 Worm   840 NSLTSAYVCCGSTSMDVCPSEERAFIN-------------------SLDETVRECAINVPGSCPS 885

  Fly   811 DIEINGHLIEPRH---VVKTERVVGE---------------VALDNCNYIDP------------- 844
            |.....:....|:   ...||.|..:               ..|:|.|....             
 Worm   886 DFLCRFNAQRNRYYCCAPTTENVCPDGRALFRAKKTLLPVRCTLNNANTCSDGYSCQSRSKNVLQ 950

  Fly   845 ---CKRPNTCEHGGKCFVKDDR------------VTCDCKHTGYIGKNCHFTKYRKTCEELALLG 894
               |...|.|: |...|:.|::            ::|.      :|..||    ::|  ..|:.|
 Worm   951 GFCCSARNVCK-GDSEFLMDEKSKMPRICTPGAFISCP------VGYRCH----KQT--PSAMSG 1002

  Fly   895 F---------------------TKSDVYLID---IDGNGVFPPAHVKCD----FQSLENATKTIV 931
            |                     .|::|...|   .:..|.  ||...|.    ||..:...|..:
 Worm  1003 FCCRGEINAISEGCPPGEYAYAKKNEVVACDPFNPENKGC--PATFSCQFAVAFQRYQCCGKDPI 1065

  Fly   932 EHNLPSQVDVRSARESDFSFNIRYREFS-PHMLQELIS--HSLYCT---------QYIKYDCYRA 984
            |.:                 .|...|.. ||....|::  |.:.||         .:.::.....
 Worm  1066 EED-----------------EIEQEELGCPHSQVALVNNDHPVVCTASGASCPTGYFCQFSDRNK 1113

  Fly   985 QLEL--HSATWFTSSAKNLTVDFLGNVKRGACPCSVNKTCVDPNQSCNCDVKENKWNSDEGYYQD 1047
            |.:.  |.|.....|...|  |..|    ||..|||.........||.        ||..|    
 Worm  1114 QFQCCGHKAGCPGDSVAYL--DLTG----GAQECSVKLRNCPEGYSCQ--------NSKGG---- 1160

  Fly  1048 PQSLGITNMYFLQQKDMDDEAQGRITLGP 1076
             :::..|.....:.:.|..|....||:.|
 Worm  1161 -KTICCTARIGGRDRPMIGEGSSNITIAP 1188

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
axoNP_001246631.1 KU 119..171 CDD:238057 15/63 (24%)
Laminin_G_2 275..411 CDD:280389 23/164 (14%)
EGF_CA 433..476 CDD:238011 9/42 (21%)
Laminin_G_2 514..640 CDD:280389 23/127 (18%)
Laminin_G_2 698..817 CDD:280389 25/125 (20%)
EGF_CA 842..878 CDD:238011 8/63 (13%)
Laminin_G_2 1112..1240 CDD:280389
EGF_CA 1256..1297 CDD:238011
Laminin_G_2 1351..1503 CDD:280389
LamG 1612..1733 CDD:304605
T22F7.3NP_497207.4 EB 144..199 CDD:396311 5/18 (28%)
KU 311..365 CDD:197529 14/59 (24%)
KU <450..486 CDD:197529 9/69 (13%)
Kunitz_BPTI 533..584 CDD:394972 7/56 (13%)
Kunitz_BPTI 639..693 CDD:394972 13/59 (22%)
Kunitz_BPTI 747..800 CDD:394972 18/107 (17%)
Lustrin_cystein 1077..1118 CDD:405330 7/40 (18%)
EB 1218..1269 CDD:396311
EB 1295..1346 CDD:396311
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4295
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.