DRSC/TRiP Functional Genomics Resources

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Protein Alignment axo and Nrxn3

DIOPT Version :10

Sequence 1:NP_001246631.1 Gene:axo / 43923 FlyBaseID:FBgn0262870 Length:2179 Species:Drosophila melanogaster
Sequence 2:XP_036013122.1 Gene:Nrxn3 / 18191 MGIID:1096389 Length:1584 Species:Mus musculus


Alignment Length:1902 Identity:389/1902 - (20%)
Similarity:649/1902 - (34%) Gaps:639/1902 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   270 EISFQFRTRLPHGLLVYHNVKNPDRINLDPYALYVIVEKGQLKVVHVFGKHSTSVTV--GESLNR 332
            ::||||:|.:..|||:|.:    |....|...|.::..:.||:    |.......||  .:.:|.
Mouse    50 DLSFQFKTNVSTGLLLYLD----DGGVCDFLCLSLVDGRVQLR----FSMDCAETTVLSNKQVND 106

  Fly   333 DEWHSVMVRIDVHGARLIARVDNSQEEV-----YLKGLNHEYNYGVSTNL-PSVVLVGGLSSEEK 391
            ..||.:||..|.....|:...:....|:     |:..::..:..||..:: ||.:.:.|:.|...
Mouse   107 SSWHFLMVSRDRVRTGLVIDGEGQSGELRPQRPYMDVVSDLFLGGVPADIRPSALTLDGVQSMPG 171

  Fly   392 LHGVKYITESFVGCIRNVVLSSGKAASDLLPIAPLVATKHENVNEGCSDMCESRHNLCFVGSRCI 456
            ..|:.            :.|..|.:...||        ..::|.......|..|.  |..|..|.
Mouse   172 FKGLM------------LDLKYGNSEPRLL--------GSQSVQLEAEGPCGERP--CENGGICF 214

  Fly   457 NHYGGISCDCFGTHYEGEHC--DIYTA-------------------TIITLRGASYVSYRIYDWK 500
            ...|..:|||..|.|.|..|  |:...                   .:.|.||:.|:.|.:.  :
Mouse   215 LLDGHPTCDCSTTGYGGTLCSEDVSQGPGLSHLMMSEQGRSKAREENVATFRGSEYLCYDLS--Q 277

  Fly   501 DRVHSSTRRISLMFRTNFDDSALFYASGESLKHQYIAASIKNQSVHVEMDFGDNVMSTV---LTD 562
            :.:.||:..|:|.|:| :..:.|...:|:|.  .|:..::|:.:|.:.::.|......:   :..
Mouse   278 NPIQSSSDEITLSFKT-WQRNGLILHTGKSA--DYVNLALKDGAVSLVINLGSGAFEAIVEPVNG 339

  Fly   563 DLTRGYWHNLTILHEQRTVSIILDQQQKVLELPATASG------NML-FDPEIYFGGGPELHKKK 620
            ......||::.:....|.|:|.:|   .:|    |.:|      .|| .|...|.||.|......
Mouse   340 KFNDNAWHDVKVTRNLRQVTISVD---GIL----TTTGYTQEDYTMLGSDDFFYVGGSPSTADLP 397

  Fly   621 GLASHNNFVGSLKYVYYNDISILYELQR----GNPKVHYHGVLEAEF-VENEVNVIPITYPFATS 680
            |....|||:|.||.|.|.:..|..||.|    |:.|:..:|  |..| .||...:.||.:....:
Mouse   398 GSPVSNNFMGCLKEVVYKNNDIRLELSRLARIGDTKMKIYG--EVVFKCENVATLDPINFETPEA 460

  Fly   681 HIWWP-INHAEEFNIKFDFRSSRPGAVLAYS--------DVTTSAGN--GFWEIRLTSDKLSFDL 734
            :|..| .|.....:|.||||::.|..::.::        ||.:....  .|:.:.|....|.  |
Mouse   461 YISLPKWNTKRMGSISFDFRTTEPNGLILFTHGKPQERKDVRSQKNTKVDFFAVELLDGNLY--L 523

  Fly   735 VPDVNNNVTHSTTIKINRAT-------SWHSVEL--DYKLGEIRFTVDYRHT------------- 777
            :.|:.     |.|||: :||       .|:.|::  |.:.|.|  :|:.|.|             
Mouse   524 LLDMG-----SGTIKV-KATQKKANDGEWYHVDIQRDGRSGTI--SVNSRRTPFTASGESEILDL 580

  Fly   778 LSQMY--GLTFNIGDKLIIGSSLKSAAM--GLVGCIRDIEINGHLIEPRHVVKTERVVG------ 832
            ...||  ||..|... ||:.:.|.:|.:  |.||||||:.|:|.....|.:.:.:...|      
Mouse   581 EGDMYLGGLPENRAG-LILPTELWTAMLNYGYVGCIRDLFIDGRSKNIRQLAEMQNAAGVKSSCS 644

  Fly   833 EVALDNCNYIDPCKRPNTCEHGGKCFVKDDRVTCDCKHTGYIGKNCHFTKYRKTCEELALLGFTK 897
            .::...|:.. |||....|:.|...|:      |||..|||.|:.|.        .|.::|.:..
Mouse   645 RMSAKQCDSY-PCKNNAVCKDGWNRFI------CDCTGTGYWGRTCE--------REASILSYDG 694

  Fly   898 SDVYLIDIDGNGVFPPAHVKCDFQSLENATKTIVEHNLPSQVDVRSARESDFSFNIRYREFSPHM 962
            | :|:                         |.|:...:.::.:       |.||           
Mouse   695 S-MYM-------------------------KVIMPMVMHTEAE-------DVSF----------- 715

  Fly   963 LQELISHSLYCTQYIKYDCYRAQLELHSATWFTSSAKNLTVDFLGNVKRGACPCSVNKTCVDPNQ 1027
              ..:|...|              .|..||....||..|.::..|    |.....||..|:..| 
Mouse   716 --RFMSQRAY--------------GLLVATTSRDSADTLRLELDG----GRVKLMVNLDCIRIN- 759

  Fly  1028 SCNCD-----------VKENKWNSDEGYYQDPQSLGITNMYFLQQKDMDDEAQGRIT-------- 1073
             ||..           :.:|:|::.. ..:..:||.:|       .| ||.|:|.:.        
Mouse   760 -CNSSKGPETLYAGQKLNDNEWHTVR-VVRRGKSLKLT-------VD-DDVAEGTMVGDHTRLEF 814

  Fly  1074 ---------------------LGPLECVETNTQKYV--------------------------VTF 1091
                                 :|.|:.:..|...|:                          |||
Mouse   815 HNIETGIMTEKRYISVVPSSFIGHLQSLMFNGLLYIDLCKNGDIDYCELKARFGLRNIIADPVTF 879

  Fly  1092 TTSQSYI---EVPGWRKGDIAFSFRTTGEKAILLFQPPIRPHYPSFMVALTGDDQ---------- 1143
            .|..||:   .:..:....:.|.|:||.....:||.              :||..          
Mouse   880 KTKSSYLTLATLQAYTSMHLFFQFKTTSADGFILFN--------------SGDGNDFIAVELVKG 930

  Fly  1144 -LTFTFTLSTGTTRELVI--NSHRRLNGGEWHKIWI--DYNQYH--------VRFMINTDYQMLD 1195
             :.:.|.|..|..   ||  ||.|.||..:||.:.|  |.:..|        |..:|| ..:.||
Mouse   931 YIHYVFDLGNGPN---VIKGNSDRPLNDNQWHNVVITRDSSNTHSLKVDTKVVTQVIN-GAKNLD 991

  Fly  1196 LLPEEEFGPFEGSMYIGGAT----FDLLKKLSVKAGLIGCFRGLVVNGEILDIYSYMSVHLSEII 1256
            |         :|.:|:.|..    .:|.|.::.:.|..||...:.:||.:.|:.:.......:|.
Mouse   992 L---------KGDLYMAGLAQGMYSNLPKLVASRDGFQGCLASVDLNGRLPDLINDALHRSGQIE 1047

  Fly  1257 KDCK----------PS--CVPSPCRNGAQCKELWSSFKCVCNNPWAHIGEFCETNINEKALTFI- 1308
            :.|:          ||  |....|.|...|.:.|..|.|.|:.. ::.|..|    |:...|:| 
Mouse  1048 RGCEVALTKADLQGPSTTCQEDSCANQGVCMQQWEGFTCDCSMT-SYSGNQC----NDPGATYIF 1107

  Fly  1309 -------------NRESFLMRNYLSVGATPVILMHGINGERDVLKGILNQDLLINLRTYDTNALV 1360
                         |.......:.|:||.:..: ..||....|...|:                  
Mouse  1108 GKSGGLILYTWPANDRPSTRSDRLAVGFSTTV-KDGILVRIDSAPGL------------------ 1153

  Fly  1361 LYANDHYNNFVHLYISLNREIVFLYNYGDEIVNLTLLDDTLMASLKSIQVAIVRGEQETRMHVNE 1425
                   .:|:.|:|...: |..::|.|                  ::.::|    :|.|..||:
Mouse  1154 -------GDFLQLHIEQGK-IGVVFNIG------------------TVDISI----KEERTPVND 1188

  Fly  1426 ---HSVSIDR----GTLLLDEY---ANKPWSNPEKEVLS------PHRPPAPPTEYF-------- 1466
               |.|...|    .||.:|.:   .:.|..|.:.|.|.      |.:...|..|:.        
Mouse  1189 GKYHVVRFTRNGGNATLQVDNWPVNEHYPTGNTDNERLQMVKQKIPFKYNRPVEEWLQEKGRQLT 1253

  Fly  1467 ------QFHVGGYDPANLLRPNVDAPALEGYIGCVRGLKI-GAQLIDLADINERNIAPTQEGVLP 1524
                  |..:||.|...|.:            |.:.||.. |.:::::|..|..||.       .
Mouse  1254 IFNTQAQIAIGGKDKGRLFQ------------GQLSGLYYDGLKVLNMAAENNPNIK-------I 1299

  Fly  1525 NCQIKCDAE-PCKNGGTCQEHFAEQLSTCDCEHTSFLGEFCSEEKGADFSGESTLQRKFELPGTG 1588
            |..::...| |..:|.|.......::||...|.|:.:.              :|..||       
Mouse  1300 NGSVRLVGEVPSVSGTTQTTSMPPEMSTTVMETTTTMA--------------TTTTRK------- 1343

  Fly  1589 RVDYVRLQLAFSSFDLRRANRIMLLMQTEAERSYYLLLAITSDGYLQLEEDRDNGQTVGARIDRN 1653
                               ||....:|.            |||                     :
Mouse  1344 -------------------NRSTASIQP------------TSD---------------------D 1356

  Fly  1654 FLNSARHSVYYVRNGTQSQLFIDREQVPLSEFAARVLTT----GG-----------DAGSNRVQI 1703
            .::||..|       :..:.|::.|  |.::   :.|:|    ||           |...|:|..
Mouse  1357 LVSSAECS-------SDDEDFVECE--PSTD---KSLSTSIFEGGYKAHAPKWESKDFRPNKVSE 1409

  Fly  1704 GGINSTDS------RFAVFKSYSGCLSNIYI-QVNGHVMKPLEEYMLFTKSGADNITVINPQGVR 1761
            ....:|.|      ||.. .|.||.:..:.. ::|...:||..:.:|.....|            
Mouse  1410 TSRTTTTSLSPELIRFTA-SSSSGMVPKLPAGKMNNRDLKPQPDIVLLPLPTA------------ 1461

  Fly  1762 SAQCNAKFDVSEQPTQEPMVNVSM---IPEPWVEEPP-ARVPYIPRFVYDENKQEDSTQVVFLTL 1822
                   :::.....:.|::...|   :|.....||. .|||.....:    ::..||..:.:.:
Mouse  1462 -------YELDSTKLKSPLITSPMFRNVPTANPTEPGIRRVPGASEVI----RESSSTTGMVVGI 1515

  Fly  1823 TSVFVIIVICCLLEVYRSHLAYKKRIE--RETDEDIIWSKEQATKMHESPGVKAGLLGGVTAGSG 1885
            .:...:.::..|..:|:    |:.|.|  .:.||    ::...:...:|.|.   |:....|.|.
Mouse  1516 VAAAALCILILLYAMYK----YRNRDEGSYQVDE----TRNYISNSAQSNGT---LMKEKQASSK 1569

  Fly  1886 NGLPPYTYKALPQEDKK 1902
            :|     :|....:||:
Mouse  1570 SG-----HKKQKNKDKE 1581

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
axoNP_001246631.1 Kunitz-type 119..170 CDD:438633
Laminin_G_2 275..413 CDD:460494 31/145 (21%)
EGF_CA 433..476 CDD:238011 13/42 (31%)
Laminin_G_2 514..640 CDD:460494 34/135 (25%)
Laminin_G_2 698..817 CDD:460494 41/154 (27%)
EGF_CA 842..878 CDD:238011 13/35 (37%)
Laminin_G_2 1112..1240 CDD:460494 37/154 (24%)
EGF_CA 1256..1297 CDD:238011 12/52 (23%)
Laminin_G_2 1351..1503 CDD:460494 33/182 (18%)
Laminin_G_2 1612..1733 CDD:460494 25/142 (18%)
PHA03247 <1895..2164 CDD:223021 2/8 (25%)
Nrxn3XP_036013122.1 LamG 27..181 CDD:238058 34/150 (23%)
EGF 202..231 CDD:394967 11/30 (37%)
LamG 286..417 CDD:214598 36/140 (26%)
LamG 474..623 CDD:214598 44/159 (28%)
EGF_CA 651..684 CDD:238011 14/39 (36%)
LamG 712..846 CDD:214598 31/175 (18%)
Laminin_G_2 903..1031 CDD:460494 37/154 (24%)
LamG 1104..1283 CDD:238058 42/239 (18%)
Syndecan 1510..1562 CDD:460035 10/62 (16%)
4.1m 1530..1548 CDD:128590 6/25 (24%)
Blue background indicates that the domain is not in the aligned region.

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