DRSC/TRiP Functional Genomics Resources

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Protein Alignment axo and F30H5.3

DIOPT Version :9

Sequence 1:NP_001246631.1 Gene:axo / 43923 FlyBaseID:FBgn0262870 Length:2179 Species:Drosophila melanogaster
Sequence 2:NP_497206.1 Gene:F30H5.3 / 175207 WormBaseID:WBGene00017937 Length:1599 Species:Caenorhabditis elegans


Alignment Length:578 Identity:104/578 - (17%)
Similarity:164/578 - (28%) Gaps:188/578 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    60 GLAGSSTGGQSLPDTGGGNSAGGSPAGGSSGTGGGG------SNSGISGNNSAMIQGQKSNQYEK 118
            |..|:|....:..|..|....||.|.||:......|      :.....|.:........|:...:
 Worm   704 GCDGNSNNFATREDCEGYCGVGGCPNGGTPERNEFGQLMVCSTTQVCPGTHECTSVNSGSSVVNR 768

  Fly   119 CAGPGDPGPCKQYI----------------YKWRYEPTTNECTNFIWGGCEGNPQNRFGTEAECL 167
            |.      |.:.||                .::.:...|.|||.|.:.||.|| .|.|.|..:|.
 Worm   769 CC------PTRAYICSLPPQQGSSCSSSAAARFYFNIVTKECTQFTYNGCSGN-LNNFATLEQCN 826

  Fly   168 FHCIGGPHTLP---PFLQSTTREPSTTESSMLLGLP------YTQSPAQS-----------PDG- 211
            ..|:....| |   .::...|..|....:::....|      |.|..:.|           |:| 
 Worm   827 NFCLSAACT-PGDVAYVNPNTNMPYECNAALSNSCPTNFACTYDQLSSNSVCCGATNMDVCPEGE 890

  Fly   212 ---MGGAEGGDGTTPVPIEQRGPELTFAE--------------TG----QGKTF----------- 244
               :..|:.|.....:.:|...|......              ||    .||..           
 Worm   891 KAYVNAADMGVRECLINVEGSCPSNYLCRFNAMKNRYYCCASITGDLCPSGKALYKEPSSKAPIR 955

  Fly   245 --IFAKNN---TFIQMDGDIIQTFQLRLC---------REISFQFRTRLPHGLLVYHNVKNPDRI 295
              |.:.||   |......|:...||...|         .|...:..:::|....|...:..|:..
 Worm   956 CTISSNNNQCPTGYTCQSDVPGAFQGYCCSGNHLCPNKAEFYLEESSQMPRSCTVGAFITCPNGY 1020

  Fly   296 NLD-----------------------PYALYVIVEKGQLKVVHVFGKHSTSVTVGESLNRDEWHS 337
            :..                       |...||.::..|:.....|...:.....|.|.   :|..
 Worm  1021 SCQSTQNEFTTGFCCKGEVASVSDGCPPNEYVFMKDNQIAPCDPFNPPNAPCPNGYSC---QWSL 1082

  Fly   338 VMVRIDVHGA------RLIARVDNSQEEVYLK--------------------------GLNHEYN 370
            ...|....||      :.||.:.....:|..:                          ..|:::.
 Worm  1083 ANQRYQCCGATPITTPKSIAALGCPNNQVAFREKASNAPRICTAASQNCPTGFFCQFSTANNQFQ 1147

  Fly   371 -YGVSTNLP--SVVLVGGLSSEEKLHGVKYIT-ESFVGCIRNVVLSSGKAASDLLPIAPLVATKH 431
             .|:|...|  ||..: |::.|.:...:...| .|...|.|.:..:.....::..|:.|...|| 
 Worm  1148 CCGMSGGCPNDSVAFI-GITGEPQSCAIGQSTCPSGYSCQRAISGAQLCCTTNDEPVGPTTPTK- 1210

  Fly   432 ENVNEGCS-----------------DMCESRHNLCFVGSRCINHYGGISCDCFGTHYE 472
                 ||:                 |:| |....|..||.|....    |.|...|:|
 Worm  1211 -----GCTEKQVEVEGACLDKKSLGDIC-SNQVQCPTGSLCKESV----CSCPEGHHE 1258

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
axoNP_001246631.1 KU 119..171 CDD:238057 17/67 (25%)
Laminin_G_2 275..411 CDD:280389 29/194 (15%)
EGF_CA 433..476 CDD:238011 13/57 (23%)
Laminin_G_2 514..640 CDD:280389
Laminin_G_2 698..817 CDD:280389
EGF_CA 842..878 CDD:238011
Laminin_G_2 1112..1240 CDD:280389
EGF_CA 1256..1297 CDD:238011
Laminin_G_2 1351..1503 CDD:280389
LamG 1612..1733 CDD:304605
F30H5.3NP_497206.1 EB 135..182 CDD:279949
KU 330..391 CDD:197529
KU <481..516 CDD:197529
Kunitz_BPTI 562..613 CDD:278443
Kunitz_BPTI 669..723 CDD:278443 5/18 (28%)
Kunitz_BPTI 776..829 CDD:278443 14/53 (26%)
Lustrin_cystein 1106..1149 CDD:291299 2/42 (5%)
EB 1212..1263 CDD:279949 12/52 (23%)
EB 1267..1318 CDD:279949
Lustrin_cystein 1467..1511 CDD:291299
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4295
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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