DRSC/TRiP Functional Genomics Resources

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Protein Alignment axo and Ambp

DIOPT Version :9

Sequence 1:NP_001246631.1 Gene:axo / 43923 FlyBaseID:FBgn0262870 Length:2179 Species:Drosophila melanogaster
Sequence 2:NP_031469.1 Gene:Ambp / 11699 MGIID:88002 Length:349 Species:Mus musculus


Alignment Length:92 Identity:30/92 - (32%)
Similarity:43/92 - (46%) Gaps:7/92 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    81 GGSPAGGSSGTGG--GGSNSGISGNNSAMIQGQKSNQYEKCAGPGDPGPCKQYIYKWRYEPTTNE 143
            |.|.|..:...||  |..|:.||..:..    |.......|..|...|||:.:|..|.::....:
Mouse   250 GASMACETFQYGGCLGNGNNFISEKDCL----QTCRTIAACNLPIVQGPCRAFIKLWAFDAAQGK 310

  Fly   144 CTNFIWGGCEGNPQNRFGTEAECLFHC 170
            |..|.:|||:|| .|:|.:|.||..:|
Mouse   311 CIQFHYGGCKGN-GNKFYSEKECKEYC 336

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
axoNP_001246631.1 KU 119..171 CDD:238057 20/52 (38%)
Laminin_G_2 275..411 CDD:280389
EGF_CA 433..476 CDD:238011
Laminin_G_2 514..640 CDD:280389
Laminin_G_2 698..817 CDD:280389
EGF_CA 842..878 CDD:238011
Laminin_G_2 1112..1240 CDD:280389
EGF_CA 1256..1297 CDD:238011
Laminin_G_2 1351..1503 CDD:280389
LamG 1612..1733 CDD:304605
AmbpNP_031469.1 Lipocalin 41..185 CDD:278490
Kunitz_BPTI 230..281 CDD:278443 10/34 (29%)
Kunitz_BPTI 285..337 CDD:278443 20/53 (38%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4295
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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