DRSC/TRiP Functional Genomics Resources

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Protein Alignment axo and cntnap4

DIOPT Version :9

Sequence 1:NP_001246631.1 Gene:axo / 43923 FlyBaseID:FBgn0262870 Length:2179 Species:Drosophila melanogaster
Sequence 2:XP_031746836.1 Gene:cntnap4 / 100498435 XenbaseID:XB-GENE-6052455 Length:1313 Species:Xenopus tropicalis


Alignment Length:1203 Identity:285/1203 - (23%)
Similarity:487/1203 - (40%) Gaps:259/1203 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   329 SLNRDEWHSVMVRIDVHGARLIARVDNSQEEVYLKGLNHEYNYGVSTNLPSVVLVGGLSSE--EK 391
            |.|:.:|    ::||:            .|...:.|:..:..||.|..:.|.||:...:..  ::
 Frog    78 SSNKYQW----LQIDL------------GERSEITGIATQGKYGSSDWVTSYVLMFSDTGRNWKQ 126

  Fly   392 LHGVKYITESFVG----------CIRNVVLSSGKAASDLLPIAPLVATKHENVNEGCSDMCESRH 446
            .|..:.|:| |:|          .::|.:::.      .|.|||        ||           
 Frog   127 YHQEESISE-FIGNTNADSVVHHKLQNHIIAR------FLRIAP--------VN----------- 165

  Fly   447 NLCFVGSRCINHYG--GISCDCFGTHYEGEHCDIYTATIITLRGASYVSYRIYDWKDRVHSSTRR 509
                     .|.||  |:..:.:|..|..:        ::.|.|.|.:.||   ::.::.|:.:.
 Frog   166 ---------WNSYGRIGMRVEMYGCAYRSD--------MVYLDGKSSILYR---FQQKLMSTVKD 210

  Fly   510 -ISLMFRTNFDDSALFYASGESLKH---QYIA-----------ASIKNQSVHVEMDFGDNVMSTV 559
             |||.|:|...|..|.:..|::..|   |.|.           |.....:.||.:..|.      
 Frog   211 VISLKFKTMQSDGVLLHGDGQNGDHITLQLIKGQLSLIINLGNAQFHPSTPHVNVSLGS------ 269

  Fly   560 LTDDLTRGYWHNLTILHEQRTVSIILDQQQKVLELPATASGNML-FDPEIYFGGGPELHKKKGLA 623
            |.||   ..||::.|....|.|:..:|:.  ||..........| .|.|:.|||.|...|...|.
 Frog   270 LLDD---QQWHSVIIERFSRQVNFSVDRH--VLHFFMKGDTYHLDIDYELSFGGIPLKGKSVSLL 329

  Fly   624 SHNNFVGSLKYVYYNDISILYELQRGNPKVHYHGVLEAEFVENEVNVIPITYPFATSHIWWPINH 688
             ..||.|..:.:|||.::|:...:|..|:::..|.:....||.|  .:|:|:..:.|.:......
 Frog   330 -QKNFHGCFENLYYNGVNIIDLAKRYKPQIYIVGNISYSCVEPE--TVPVTFLNSNSFLALRGLQ 391

  Fly   689 AEEFNIKFDFRS-SRPGAVLAYS------DVTTSAGNGFWEIRLTSDKLSFDLVPDVNNNVTHST 746
            .:...:.|.||: ::.|.:.:|.      |:.         :.:|..|....|.....:....:|
 Frog   392 QDGLAVHFQFRTWNKDGTLFSYKLGPESLDLV---------LYMTDGKFKMSLFKHGRSQSNTAT 447

  Fly   747 TIKINRATSWHSVELDYKLGEIRFTVDYRHTLSQMYGLTFNIGD--KLIIG------------SS 797
            ...:|.. .|||:....|...:..|:|.:.|||....|...:|.  ....|            |.
 Frog   448 GFDLNNG-HWHSLSFVGKRNRLIVTIDNQETLSLQTALPIQLGSGHYYYFGGCPDNNTDHGCFSP 511

  Fly   798 LKSAAMGLVGCIRDIEINGHLIEPRHVVKTERVVG------EVALDNCNYIDPCKRPNTCEHGGK 856
            :||    .:||::.|.|..:||:   ::..::  |      ::..|.|..||.| .||.|||.|:
 Frog   512 VKS----FLGCVKLISIGSNLID---IISIQQ--GKFGNFTDLQFDICGIIDRC-LPNYCEHRGQ 566

  Fly   857 CFVKDDRVTCDCKHTGYIGKNCHFTKYRKTCEELALLGFTKSDVYLIDIDGNGVFPPAHVKCDFQ 921
            |....:...|:|..|||.|..||::.|.|:||.....|.| |..:|||.||:|...|..|.|:. 
 Frog   567 CSQTWNDFYCNCSETGYTGATCHYSIYEKSCEAYKHKGNT-SGFFLIDPDGSGPLEPFAVYCNM- 629

  Fly   922 SLENATKTIVEHNLPSQVDVR-SARESDFSFNIRYREFSP-HMLQELISHSLYCTQYIKYDCYRA 984
             |:.|. |::.||......|: |.:|:....|.:|  |:. ..||....::.:|.|.:.|.|.::
 Frog   630 -LDTAV-TVISHNNTDMNKVKNSNKENPHVMNFKY--FADLAQLQATTDNAEHCKQELAYHCKKS 690

  Fly   985 QLELHSA-----TWFTSSAKNLTVDFLG---NVKRGACPCSVNKTCVDPNQSCNCDVKENKWNSD 1041
            :: ||..     :|:..........:.|   :|.:  |.|.:.:.|:|....||||..:::|::|
 Frog   691 RI-LHKQSHIPYSWWVGRTNETQTYWSGSSPDVSK--CTCGIEENCIDSQLYCNCDADKSEWSND 752

  Fly  1042 EGYYQDPQSLGITNMYFLQQKDMD-DEAQGRITLGPLECVETNTQKYVVTFTTSQSYIEVP---G 1102
            .|:......|.:|.:..   .|.| .:::....||||.|....:.....:|.|..||:..|   |
 Frog   753 TGFLSYKDHLPVTKIVI---TDTDRPQSEAAYKLGPLLCWGDRSFWNSASFNTVSSYLHFPTLHG 814

  Fly  1103 WRKGDIAFSFRTTGEKAILLFQPPIRPHYPSFMVALTGDDQLTFTFTLSTGTTRELVINSHRRLN 1167
            ....|::|.|:|:....:.|....|:..   ..:.|....::.|:|.:..|.. .:.:.|...||
 Frog   815 EISADVSFFFKTSSPSGLFLENLGIKDF---IRIELQSPTEVVFSFDVGNGPF-GVTVQSPSNLN 875

  Fly  1168 GGEWHKIWIDYNQYHVRFMINTDYQMLDLLPEEE-FGPFEG--------SMYIGGATFDLLKKLS 1223
            ..:||.|..:.|       |......:|.||::. ..|.:|        .:||||..       |
 Frog   876 DNQWHFIKAERN-------IKEASLQVDQLPQKTIITPSDGHIRLQLNSQLYIGGTA-------S 926

  Fly  1224 VKAGLIGCFRGLVVNGEILDIYSYMSVHLSEIIKDCKPSC------VPSPCRNGAQCKELWSSFK 1282
            .:.|.:||.|.|.:||..||:     ...:::....||.|      ..:.|.||.:|:|..:.|.
 Frog   927 RQKGFLGCIRYLTLNGIALDL-----EERAKVTPGIKPGCPGHCSSYGNLCHNGGKCEEKHNGFL 986

  Fly  1283 CVCNNPWAHIGEFCETNI-------NEKALTFINRESF-LMRN---YLSVGATPVILMHGINGER 1336
            |.||:. |:.|.||:..|       :...|||  .|:: :.||   |.|.       .|.....|
 Frog   987 CDCNSS-AYGGPFCKKEISAYFGGGSSATLTF--PENYTISRNASWYSSA-------QHPDTNSR 1041

  Fly  1337 DVLKGILNQDLLINLRTYDTNALVLYANDHYNNFVHLYISLNREIVFLY----NYGDEIVNL--- 1394
                    :::..:.||..:.:|:|:.:.....::.:.|:.|..:...|    :...::.|:   
 Frog  1042 --------ENIAFSFRTTQSPSLLLFVSSFNKQYISIIIAKNGSLQIRYKLEHHLDPDVFNINTK 1098

  Fly  1395 TLLDDTLMASLKSIQVAIVRGEQETRMHVNEHS 1427
            .|:|..|.      :|.|:|..:...:.||:::
 Frog  1099 NLVDGHLQ------KVRILRKGETLFIEVNQYT 1125

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
axoNP_001246631.1 KU 119..171 CDD:238057
Laminin_G_2 275..411 CDD:280389 19/93 (20%)
EGF_CA 433..476 CDD:238011 8/44 (18%)
Laminin_G_2 514..640 CDD:280389 38/140 (27%)
Laminin_G_2 698..817 CDD:280389 29/139 (21%)
EGF_CA 842..878 CDD:238011 16/35 (46%)
Laminin_G_2 1112..1240 CDD:280389 32/136 (24%)
EGF_CA 1256..1297 CDD:238011 15/46 (33%)
Laminin_G_2 1351..1503 CDD:280389 16/84 (19%)
LamG 1612..1733 CDD:304605
cntnap4XP_031746836.1 FA58C 36..180 CDD:238014 29/152 (19%)
Laminin_G_2 216..345 CDD:396680 38/140 (27%)
Laminin_G_2 401..527 CDD:396680 29/139 (21%)
EGF_CA 553..588 CDD:238011 16/35 (46%)
COLFI 607..>690 CDD:413320 27/87 (31%)
Laminin_G_2 824..943 CDD:396680 32/136 (24%)
EGF_CA 965..1000 CDD:238011 12/35 (34%)
Laminin_G_2 1048..1179 CDD:396680 16/84 (19%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D171014at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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