DRSC/TRiP Functional Genomics Resources

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Protein Alignment axo and aplp2

DIOPT Version :9

Sequence 1:NP_001246631.1 Gene:axo / 43923 FlyBaseID:FBgn0262870 Length:2179 Species:Drosophila melanogaster
Sequence 2:XP_017951425.2 Gene:aplp2 / 100380132 XenbaseID:XB-GENE-5894468 Length:753 Species:Xenopus tropicalis


Alignment Length:52 Identity:18/52 - (34%)
Similarity:29/52 - (55%) Gaps:1/52 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly   119 CAGPGDPGPCKQYIYKWRYEPTTNECTNFIWGGCEGNPQNRFGTEAECLFHC 170
            |:.....|||:..:.:|.::....:|..||:|||.|| :|.|.:|..|:..|
 Frog   294 CSQEAMTGPCRAMMPRWYFDLGQKKCVRFIYGGCGGN-RNNFESEDYCMAVC 344

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
axoNP_001246631.1 KU 119..171 CDD:238057 18/52 (35%)
Laminin_G_2 275..411 CDD:280389
EGF_CA 433..476 CDD:238011
Laminin_G_2 514..640 CDD:280389
Laminin_G_2 698..817 CDD:280389
EGF_CA 842..878 CDD:238011
Laminin_G_2 1112..1240 CDD:280389
EGF_CA 1256..1297 CDD:238011
Laminin_G_2 1351..1503 CDD:280389
LamG 1612..1733 CDD:304605
aplp2XP_017951425.2 A4_EXTRA 31..195 CDD:128326
Kunitz_BPTI 293..345 CDD:394972 18/52 (35%)
APP_E2 349..531 CDD:403970
JMTM_Notch_APP 670..750 CDD:425406
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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