DRSC/TRiP Functional Genomics Resources

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Protein Alignment axo and nrxn1

DIOPT Version :9

Sequence 1:NP_001246631.1 Gene:axo / 43923 FlyBaseID:FBgn0262870 Length:2179 Species:Drosophila melanogaster
Sequence 2:XP_002935428.2 Gene:nrxn1 / 100127647 XenbaseID:XB-GENE-952913 Length:1486 Species:Xenopus tropicalis


Alignment Length:1384 Identity:304/1384 - (21%)
Similarity:500/1384 - (36%) Gaps:396/1384 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   270 EISFQFRTRLPHGLLVYHNVKNPDRINLDPYALYVIVEKGQLKV-VHVFGKHSTSVTVGESLNRD 333
            |:||..:|:...||::|.:    |....|  .|.:|:.:|:||: ..:|.....|:....::|.:
 Frog    50 EMSFNMKTKRSSGLVIYFD----DEGFCD--FLELILYEGRLKLSFSIFCAEPASLLTDLAVNDN 108

  Fly   334 EWHSVMVRIDVHGARLIARVDNSQEEVYLKGLNHEYNYGVSTNLPSVVLVGGLSSEEKLH----- 393
            :||||:::.:.....||  :|...:.|.:|....:      ..:.|.:.:||:..|  ||     
 Frog   109 KWHSVVIKRNFKNTTLI--LDKESKWVEVKSKRRD------MTVFSSLFIGGIPPE--LHSSTLK 163

  Fly   394 ----GVKYITESFVGCIRNVVLSSGKAASDLLPIAPLVATKHENVNEGCSDM-CESRHNLCFVGS 453
                .|| ....|.|.||:|.::    .||..|:.             .:|: .|...|.|....
 Frog   164 LTFPAVK-DHSPFQGWIRDVRVN----FSDSSPVT-------------SNDIRMEDEPNPCAQDR 210

  Fly   454 RCINHYGGI--------SCDCFGTHYEGEHC------------------------DIYTATIITL 486
            .|:|  |||        :|||..|.::|:.|                        :.|   |.|.
 Frog   211 VCLN--GGICSVVNEEATCDCSQTGFQGKDCSEEDNRVEGLAHLMMGDQGKTKGKEEY---IATF 270

  Fly   487 RGASYVSYRIYDWKDRVHSSTRRISLMFRTNFDDSALFYASGESLKHQYIAASIKNQSVHVEMDF 551
            :|:.|..|.:.  ::.:.||:..|:|.|:| ...:.|...:|:|.  .|:..::||.:|.:.::.
 Frog   271 KGSEYFCYDLS--QNPIQSSSDEITLSFKT-LQRNGLMLHTGKSA--DYVNLALKNGAVSLVINL 330

  Fly   552 GDNVMSTV---LTDDLTRGYWHNLTIL----------HEQRTVSI--ILDQQQKVLELPATASG- 600
            |......:   :........||::.:.          |...|:|:  ||           |.:| 
 Frog   331 GSGAFEALVEPVNGKFNDNNWHDVKVTRNLRQHSGIGHAMVTISVDGIL-----------TTTGY 384

  Fly   601 -----NML-FDPEIYFGGGPELHKKKGLASHNNFVGSLKYVYYNDISILYELQR----GNPKVHY 655
                 .|| .|...|.||.|......|....|||:|.||.|.|.:..:..||.|    |:.|:..
 Frog   385 TQEDYTMLGSDDFFYVGGSPSTADLPGSPVSNNFMGCLKEVVYKNNDVRLELSRLAKQGDAKMKV 449

  Fly   656 HGVLEAEFVENEVNVIPITYPFATSHIWWPINHAEEF-NIKFDFRSSRPGAVLAYSD----VTTS 715
            |||: |...||...:.|||:....|.|..|..:|::. :|.||||::.|..::.:|.    ....
 Frog   450 HGVV-AFKCENVATLDPITFETPESFISLPKWNAKKTGSISFDFRTTEPNGLILFSHGKPRHQKD 513

  Fly   716 AGN------GFWEIRLTSDKLSFDLVPDVNNNVTHSTTIKINRAT------SWHSVEL--DYKLG 766
            |.|      .|:.|.:....|.  |:.|:.     |.||||....      .|:.|:.  |.:.|
 Frog   514 AKNPQMIKVDFFAIEMLDGHLY--LLLDMG-----SGTIKIKAIQKKVNDGEWYHVDFQRDGRTG 571

  Fly   767 EIRFTVDYRHTLSQMY-----GLTFNIGDKLIIGSSLKSAA--------------MGLVGCIRDI 812
            .|..     :||...|     ....::.|.|.:|...::.|              .|.||||||:
 Frog   572 TISV-----NTLRTPYTAPGESEILDLDDDLYLGGLPENKAGLIFPTEVWTALLNYGYVGCIRDL 631

  Fly   813 EINGHLIEPRHVVKTERVVGEVALDNCNYIDPCKRPNTCEHGGKCFVKDDRVTCDCKHTGYIGKN 877
            .|:|...:.|.:.:.:...|.....:.....||.. |.|::.|.|....:|..|||..|||:|::
 Frog   632 FIDGQSKDIRQMAEQQSTAGVKPSCSRETTKPCIN-NPCKNNGVCRDGWNRYVCDCSGTGYLGRS 695

  Fly   878 CHFTKYRKTCEELALLGFTKSDVYLIDIDGNGVFPPAHVKCDFQSLENATKTIVEHNLPSQVDV- 941
            |.        .|..:|.:..|....|.:                       .:|.|.....|.: 
 Frog   696 CE--------REATILSYDGSMFMKIQL-----------------------PVVMHTEAEDVSLR 729

  Fly   942 -RSARESDFSFNIRYREFSPHMLQELISHSLYCTQYIKYDCYR-------------AQLELHSAT 992
             ||.|..........||.:..:..||.:..:..|  :..||.|             |...|:...
 Frog   730 FRSQRAYGILMATTSRESADTLRLELDAGRVKLT--VNLDCIRINCNSSKGPETLYAGYNLNDNE 792

  Fly   993 WFTSSAKNLTVDFLGNVKRGACPCSVNKTCVDPNQSCNCDVKENK-----WNSDEGYYQDPQSLG 1052
            |.|...          ::||    ...|..||..|.....:..:.     .|.:.|...:.:.|.
 Frog   793 WHTVRV----------IRRG----KSLKLTVDDQQGMTGQMAGDHTRLEFHNIETGIITERRYLS 843

  Fly  1053 ITNMYFLQQKDMDDEAQGRITLGPLECVETNTQKYV--------------------------VTF 1091
            :....|               :|.|:.:..|...|:                          |||
 Frog   844 VVPSNF---------------IGHLQSLTFNGMAYIDLCKNGDIDYCELNARFGFRNIIADPVTF 893

  Fly  1092 TTSQSYI---EVPGWRKGDIAFSFRTTGEKAILLFQPPIRPHYPS-----FMVALTGDDQLTFTF 1148
            .|..||:   .:..:....:.|.|:||....::|        |.|     |:|.......|.:.|
 Frog   894 KTKASYVALATLQAYTSMHLFFQFKTTSPDGLIL--------YNSGDGNDFIVVELVKGYLHYVF 950

  Fly  1149 TLSTGTTRELVINSHRRLNGGEWHKIWI--DYNQYHVRFMINTDYQM----------LDLLPEEE 1201
            .|..|... :..:|::.||..:||.:.|  |.:..|.   :..|.::          |||     
 Frog   951 DLGNGANL-IKGSSNKPLNDHQWHNVMISRDTSNLHT---VKIDTKITTQSTAGARNLDL----- 1006

  Fly  1202 FGPFEGSMYIGGATFDLLKKL----SVKAGLIGCFRGLVVNGEILDIYSYMSVHLSEIIKDCK-P 1261
                :..:||||.:.::.|.|    ..|.|..||...:.:||.:.|:.|...:...:|.:.|: |
 Frog  1007 ----KSDLYIGGVSKEMYKTLPKLVHAKEGFQGCLASVDLNGRLPDLISDALLCNGQIERGCEGP 1067

  Fly  1262 S--CVPSPCRNGAQCKELWSSFKC----------VCNNP----------------WAHIGEFCET 1298
            |  |....|.|...|.:.|..|.|          :||:|                |.. .:...|
 Frog  1068 STTCQEDSCANQGVCLQQWDGFSCDCSMTSFRGPLCNDPGITYIFSKGGGQITYTWPP-NDRPST 1131

  Fly  1299 NINEKALTF--INRESFLMRNYLSVGATPVILMHGINGERDVLKGILNQDLLINLRTYDTNALVL 1361
            ..:..|:.|  :.:|:.|:|...|.|....:.:|...|:..|...:...|:.|.    :.||:: 
 Frog  1132 RADRLAVGFSTVQKEAVLVRVDSSTGLGDYLELHIHQGKIGVKFNVGTDDISIE----EVNAII- 1191

  Fly  1362 YAND-----------------HYNNF--VHLYISLNREIVFL--------YNYGDEIVNLTLLDD 1399
              ||                 |.:|:  :..|.:.|.:...|        |..| .:|:..|||.
 Frog  1192 --NDGKYHTVRFTRSGGNATLHVDNWPVIERYPAGNNDNERLAIARQRIPYRLG-RVVDDWLLDK 1253

  Fly  1400 TLMASLKSIQVAIVRGEQE 1418
            ....::.:.|..|..|.::
 Frog  1254 GRQLTIFNSQATIKIGGKD 1272

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
axoNP_001246631.1 KU 119..171 CDD:238057
Laminin_G_2 275..411 CDD:280389 36/145 (25%)
EGF_CA 433..476 CDD:238011 14/51 (27%)
Laminin_G_2 514..640 CDD:280389 35/147 (24%)
Laminin_G_2 698..817 CDD:280389 36/155 (23%)
EGF_CA 842..878 CDD:238011 14/35 (40%)
Laminin_G_2 1112..1240 CDD:280389 35/148 (24%)
EGF_CA 1256..1297 CDD:238011 14/69 (20%)
Laminin_G_2 1351..1503 CDD:280389 18/95 (19%)
LamG 1612..1733 CDD:304605
nrxn1XP_002935428.2 LamG 27..185 CDD:238058 39/151 (26%)
EGF_CA 204..239 CDD:238011 12/36 (33%)
LamG 291..430 CDD:214598 37/152 (24%)
LamG 465..634 CDD:238058 45/180 (25%)
EGF_CA 666..697 CDD:238011 12/31 (39%)
Laminin_G_2 730..861 CDD:280389 28/161 (17%)
Laminin_G_2 917..1045 CDD:280389 35/148 (24%)
LamG 1109..1287 CDD:238058 32/173 (18%)
Syndecan 1411..>1450 CDD:279386
4.1m 1431..1449 CDD:128590
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 53 1.000 Domainoid score I11164
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.000

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