DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rok and cdc42bpaa

DIOPT Version :9

Sequence 1:NP_536796.2 Gene:Rok / 43916 FlyBaseID:FBgn0026181 Length:1390 Species:Drosophila melanogaster
Sequence 2:XP_021322967.1 Gene:cdc42bpaa / 567912 ZFINID:ZDB-GENE-120727-12 Length:1757 Species:Danio rerio


Alignment Length:1423 Identity:394/1423 - (27%)
Similarity:649/1423 - (45%) Gaps:303/1423 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 RANTLEREMRDPTSICNVDC-----LLDTVSALVSDCDHESLRRLKNIEQYAAKYKPLAMQINQL 80
            |...||:.:.|.....|..|     |||.:..:..:|.:..|||.||:.::....||...::.|:
Zfish     6 RLKKLEKLILDGPVQANGQCFSVESLLDVLICIYDECTNSPLRREKNVAEFLEWAKPFTSKVKQM 70

  Fly    81 RMNVEDFHFIKLIGAGAFGEVQLVRHKSSSQVYAMKRLSKFEMMKRPDSAFFWEERHIMAHANSE 145
            |::.|||..:|:||.||||||.:|:.|||.:|:|||.|:|:||:||.::|.|.|||.::.:.:|:
Zfish    71 RLHKEDFEILKVIGRGAFGEVAVVKVKSSDKVFAMKILNKWEMLKRAETACFREERDVLVNGDSQ 135

  Fly   146 WIVQLHFAFQDAKYLYMVMDFMPGGDIVSLMGDYD--IPEKWAIFYTMEVVLALDTIHNMGFVHR 208
            ||..||:||||..:||:|||:..|||:::|:..::  :||..|.||..|:|||:|::|.:.:|||
Zfish   136 WITTLHYAFQDDNFLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVLAIDSVHQLHYVHR 200

  Fly   209 DVKPDNMLLDSYGHLKLADFGTCMRMGANGQVVSSNAVGTPDYISPEVLQS-QGVDNEYGRECDW 272
            |:||||:|:|..||::|||||:|:::..:|.|.||.|||||||||||:||: :....:||.||||
Zfish   201 DIKPDNILIDVNGHIRLADFGSCLKLTEDGTVQSSVAVGTPDYISPEILQAMEDGKGKYGPECDW 265

  Fly   273 WSVGIFLYEMLFGETPFYADSLVGTYGKIMDHKNSLSFPPEV-EISEQAKALIRAFLTDRTQRLG 336
            ||:|:.:||||:|||||||:|||.||||||:||....||.:: ::||.||.|||..:..|..|||
Zfish   266 WSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQFPAQMTDVSENAKDLIRRLICCREHRLG 330

  Fly   337 RYGIEDIKAHPFFRNDTWSFDNIRESVPPVVPELSSDDDTRNFEDIERD-EKPEEVFPVPK--GF 398
            :.||||.|.||||....|  .|||....|.:||:||..||.|| |::.| .|..|..|.|.  .|
Zfish   331 QNGIEDFKQHPFFSGIDW--QNIRNCDAPYIPEVSSPSDTSNF-DVDDDCLKNTETMPPPSHTAF 392

  Fly   399 DGNHLPFIGFTYTGDYQLLSSDTVDAESKEANVANSGAASNNHGHGHNHRHRPSNSNEL--KRLE 461
            .|:||||:|||||.:..|         |....:..|.|              |:..:..  :.||
Zfish   393 SGHHLPFVGFTYTSNCTL---------SDRGCLRESAA--------------PAQMDVCVQRGLE 434

  Fly   462 ALLERE--RGRSEALEQQDAGLRQQIELITKREAELQRIASEYEKDLALRQHNYKVAMQKVEQEI 524
            ..|..|  ..|...|||:...|.::::..||....||     |.........|.:..::.:::||
Zfish   435 DSLATEAYERRIRRLEQEKLELGRKLQESTKAVQALQ-----YSSSDGPVSSNREFEIRGLKEEI 494

  Fly   525 ELRKKTEALLVETQRNLENEQKTRARDLNINDKVVSLEKQLLEMEQSYKTETENTQKLKKHNAEL 589
            |:.||..|...:.::.||.....|:...:.:.::.||||||    :|.|.|.::.||..:.:::.
Zfish   495 EMLKKQIADTGQVEQQLEQAISARSDMEDSSKQIRSLEKQL----KSTKQERDDLQKRLQESSDK 555

  Fly   590 DFTVKSQEEKVRDMVDMIDTLQKHKEELGQENAELQALVVQEKNLRSQLKEMHKEAENKMQTLIN 654
            . .|:.:|.|..|         ..::...||.||:...|.:.::|:.:|....::.|.::.:|..
Zfish   556 Q-KVQGKELKEAD---------SQRKMAMQEFAEVSEKVTELRSLKQRLTRQLRDKEEELDSLNQ 610

  Fly   655 DIERTMCREQKAQEDNRALLEKISDLEKAHAGLDFELKAAQGRYQQEVKAHQETEKSRLVSRE-E 718
            .:|              ||...:...|:|...::.:.:......|:|.|..   |:|...||: |
Zfish   611 KVE--------------ALRLDVRKAERAKKEMEVQAEEWSAEAQKEKKLR---ERSEQFSRQLE 658

  Fly   719 ANLQEVKALQSKLNEEKSARIKADQHSQEKERQLSMLSVDYRQ----IQLRLQKLEGECRQESEK 779
            ..|..:|        :|.........|.|:.::||.|..|..:    .:..|.::|   :|.:.:
Zfish   659 EELDSIK--------QKHVGRSPSTGSSEQNQELSKLRADLEKKTVHFKEELSRIE---QQHANE 712

  Fly   780 VAALQSQLDQEHSKRNALLSELSLHSSEVAHLRSRENQLQKELSTQREAKRRFEEDLTQLKSTHH 844
            :.:|:.:|.:...:      :||| ..|:..|:.:.::.::|..::|: :..||..|..      
Zfish   713 LKSLKKELKESEGQ------QLSL-KKEIMMLKDKLDKSRRESHSERD-ELEFERVLLS------ 763

  Fly   845 EALANNRELQAQLEAEQCFSRLYKTQANENREESAERLSKIEDLEEERVSLKH-QVQVAV----- 903
               ..|::|.::|:...|        :|:..||      ||..|.:|:.|:.| :.|:..     
Zfish   764 ---EENKKLSSELDKLSC--------SNKQLEE------KIRVLADEKESVAHWEAQITEIIQWV 811

  Fly   904 -----ARADSEALARSIAEETV----ADLEKEKT-----IKELELKDFVMKHRNEI-NAKEAALA 953
                 ||...:|||..:.||..    |.|....|     ::.|...|  |..|.|: :|.:|.:.
Zfish   812 SDEKDARGYLQALATKMTEELEGLKNASLGARATDMPWKVRRLAKLD--MSARLELQSALDAEIK 874

  Fly   954 TLKEAENELHK----------KLGQKAAEYEDL---VQQHKKQQEELALMRSSKDEEI------- 998
            ..:..::||:|          ||.:...:.:||   :|:.|::.:.|.:.:..|.::.       
Zfish   875 AKQTIQDELNKVKASHMATECKLEESEKQNQDLQAEIQRLKQETDNLRMSKGVKHQDSQNSFLAF 939

  Fly   999 ----TKLLDKCKNEVLLKQVAV-NKLAEVMNRRDSDLPKQKNKARSTAELRKKEKEMRRLQQELS 1058
                |..||:............ .::..:.|...|:.|.::...||.|....:...  ......|
Zfish   940 LNAPTSALDQFDRSTASGPAGKGRRIDSIDNFSLSNTPSREEDGRSQATSHSRSPS--TTSDVES 1002

  Fly  1059 QERDKFNQLLLKHQDLQQLCAEEQQLKQKMVME-IDCKATEIENLQSKLNETASLSSADNDP--- 1119
            .|:.|.:|.::|..:....|.:...|...::.: ..|:.         .|.:..::.||..|   
Zfish  1003 HEQPKAHQFVVKTFNTPTKCNQCTSLMVGIIRQGCTCEV---------CNFSCHVTCADKAPAVC 1058

  Fly  1120 --EDSQHSSLLSLTQD----SVFEGWLSVPNKQNRRRGHGWKRQYVIVSSRKIIFYNSDIDKHNT 1178
              ...|....|.:...    :.:||.:.||.....::  ||:|...:|...|:..|:....|...
Zfish  1059 PIPPDQTKGPLGIDPQKGIGTAYEGHVKVPKPLGVKK--GWQRAIAVVCDFKLFLYDLPEGKAAQ 1121

  Fly  1179 TDAVL--ILDL-SKVYHVRSVTQGDVIRADAKEIPRIFQLLYAGEGASHRPDEQSQLDVSVLHGN 1240
            ...|:  ::|: .:.:.|..|...|||.|:.|:||.||::                         
Zfish  1122 PGVVVNQVIDMRDEEFSVSPVLASDVIHANRKDIPCIFRV------------------------- 1161

  Fly  1241 CNEERPGTIVHKGHEFVHITYHMPTACEVCPKPLWHMFKPPAAYECKRCRNKIHKEHVDKHDPLA 1305
                                    ||.::|            |...|:|                
Zfish  1162 ------------------------TASQLC------------ASSNKKC---------------- 1174

  Fly  1306 PCKLNHDPRSARDMLLLAATPEDQSLWVA------RLLKR---------IQKSGYKAA 1348
                        .:|:||.:.::::.||.      ||||:         :.|..|..|
Zfish  1175 ------------SILILADSDQERTKWVGLLKELHRLLKKSKLKERFVYVPKEAYDCA 1220

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RokNP_536796.2 STKc_ROCK 61..411 CDD:270747 182/356 (51%)
S_TKc 87..349 CDD:214567 144/265 (54%)
SbcC 484..1088 CDD:223496 134/654 (20%)
Rho_Binding 963..1027 CDD:286056 13/88 (15%)
PH_ROCK 1134..1250 CDD:269948 24/118 (20%)
C1 1254..1307 CDD:197519 6/52 (12%)
cdc42bpaaXP_021322967.1 PKc_like 4..412 CDD:328722 198/417 (47%)
SbcC <433..>926 CDD:223496 126/572 (22%)
KELK 528..606 CDD:318090 23/91 (25%)
C1_1 1009..1059 CDD:278556 9/58 (16%)
PH_MRCK 1068..1203 CDD:269949 40/225 (18%)
CNH 1229..1495 CDD:307087
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D759391at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.920

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