DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rok and cdc42bpab

DIOPT Version :9

Sequence 1:NP_536796.2 Gene:Rok / 43916 FlyBaseID:FBgn0026181 Length:1390 Species:Drosophila melanogaster
Sequence 2:XP_021324156.1 Gene:cdc42bpab / 566003 ZFINID:ZDB-GENE-080219-17 Length:1800 Species:Danio rerio


Alignment Length:1366 Identity:392/1366 - (28%)
Similarity:635/1366 - (46%) Gaps:269/1366 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 MDVERRRRANTLEREMRDPTSICNVDC-----LLDTVSALVSDCDHESLRRLKNIEQYAAKYKPL 73
            |.||.|.:  .||:.:.|..|..:..|     |||.:..|..:|....:||.||:.::....||.
Zfish     1 MSVEVRLK--KLEKLIMDGPSQSSGQCFSMETLLDILVCLYDECSSSPIRREKNVLEFLDWAKPF 63

  Fly    74 AMQINQLRMNVEDFHFIKLIGAGAFGEVQLVRHKSSSQVYAMKRLSKFEMMKRPDSAFFWEERHI 138
            ..::.|:|::.|||..:|:||.||||||.:|:.|::.:|:|||.|:|:||:||.::|.|.|||.:
Zfish    64 TSKVKQMRLHKEDFEILKVIGRGAFGEVAVVKVKNTDKVFAMKILNKWEMLKRAETACFREERDV 128

  Fly   139 MAHANSEWIVQLHFAFQDAKYLYMVMDFMPGGDIVSLMGDYD--IPEKWAIFYTMEVVLALDTIH 201
            :.:.:.:||..||:||||...||:|||:..|||:::|:..::  :||..|.||..|:|||:|::|
Zfish   129 LVNGDCQWITTLHYAFQDENNLYLVMDYYVGGDLLTLLSKFEDRLPEDMAKFYLAEMVLAIDSVH 193

  Fly   202 NMGFVHRDVKPDNMLLDSYGHLKLADFGTCMRMGANGQVVSSNAVGTPDYISPEVLQS-QGVDNE 265
            .:.:||||:||||:|:|..||::|||||:|:::..:|.|.||.|||||||||||:||: :....:
Zfish   194 QLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEDGKGK 258

  Fly   266 YGRECDWWSVGIFLYEMLFGETPFYADSLVGTYGKIMDHKNS-------LSFPPEV-EISEQAKA 322
            ||.||||||:|:.:||||:|||||||:|||.||||||:||:|       ..||.:| ::||.||.
Zfish   259 YGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKSSQPNDEERFQFPLQVTDVSEDAKD 323

  Fly   323 LIRAFLTDRTQRLGRYGIEDIKAHPFFRNDTWSFDNIRESVPPVVPELSSDDDTRNFEDIERD-E 386
            |:|..:..|..|||:.||||.|.||||....|  ||||....|.:||:||..||.|| |::.| .
Zfish   324 LVRRLICSREHRLGQNGIEDFKQHPFFTGIDW--DNIRTCEAPYIPEVSSPTDTSNF-DVDDDCL 385

  Fly   387 KPEEVFPVPK--GFDGNHLPFIGFTYTGDYQLLSSDTVDAESKEANVANSGAASNNHGHGHNHRH 449
            |..|..|.|.  .|.|:||||:|||||               .:..:::.|....:.|......|
Zfish   386 KNCETLPPPSHTAFSGHHLPFVGFTYT---------------SKCTLSDRGCLRESVGPAQVDAH 435

  Fly   450 RPSNSNELKRLEALLERERGRSEALEQQDAGLRQQ-IELITKREAELQRI-ASEYEKDLALRQHN 512
                      ::..|| |...|||.|::...|.|: .||..|.:...|.: |.:|....|....|
Zfish   436 ----------VQRSLE-ESLASEAYERRIRRLEQEKTELTRKLQESTQTVQALQYPDSDAPVNAN 489

  Fly   513 YKVAMQKVEQEIELRKKTEALLVETQRNLENEQKTRARDLNINDKVV-SLEKQLLEMEQSYKTET 576
            .:|.::.::.||::.||..|...:.::.|||....| |||..:.||| :|||||       |:.|
Zfish   490 KEVEIRSLKSEIDILKKQIADSGQMEQQLENASTAR-RDLEDSSKVVRNLEKQL-------KSVT 546

  Fly   577 ENTQKLKKHNAELDFTVKSQEEKVRDMVDMIDTLQKHK--EELGQENAELQALVVQEKNLRSQLK 639
            :....|.|....|...||:|.::::|...     ||..  :|..:.|.:|..:..|::.|..|.|
Zfish   547 QEKDDLHKELLGLAEKVKAQGKELKDAHS-----QKKMAIKEFAELNEQLSDVRTQKQRLSRQFK 606

  Fly   640 EMHKEAENKMQTLINDIERTMCREQKAQEDNRALLEKISDLEKAHAGLDFELKAAQGRYQQEVKA 704
            :..:|.|...|.|                  .||..:|...|:....|:.:.:......|:|.|.
Zfish   607 DKEEEMEGVSQKL------------------EALRLEIRKAERMRKELEAQAEEHAAEAQKERKV 653

  Fly   705 HQETEK-SRLVSREEANLQEVK------ALQSKLNEEKSARIKAD------QHSQEKERQLSMLS 756
            .:.||: |:.:..|...::::|      ...|...:::..|::|:      |:.:|..|:.::.|
Zfish   654 RERTEQYSKQLEEELEGMKQLKQTGPPNGAASSDQQQELMRVRAELEKKSVQYEEEMCRRETLHS 718

  Fly   757 VDYRQIQLRLQKLEGECRQESEKVAALQSQLDQEHSKRNALLSELSLHSSEVAHLRSRENQLQKE 821
            .:.:.:|..|:..||:.....:::..|:.:|::..                      ||:|:::|
Zfish   719 SEMKNLQKELRDAEGQHLTHQKEILVLKDKLEKTR----------------------RESQVERE 761

  Fly   822 LSTQREAKRRFEEDLTQLKSTHHEALANNRELQAQLEAEQCFSRLYKTQANENREESAERLSKIE 886
             ....|.|:::|.:...|...:.:..|...:|..|.|           |.:.:..:..|.:.::.
Zfish   762 -EFVCEYKQKYEREKAHLTDENKKLSAEVEKLNGQFE-----------QLSSSHRQLEEEMRELA 814

  Fly   887 DLEEERVSLKHQVQVAV--------ARADSEALARSIAEE------------------------- 918
            |.:|.....:.|:...:        ||...:|||..:.||                         
Zfish   815 DKKESVAHWEAQITEIIQWVSDEKDARGYLQALATKMTEELEGLRNTSLGARGTDMPWKMRRFAK 879

  Fly   919 --TVADLEKEKTI-KELELKDFVMKHRNEINAKEAAL-ATLKEAENELHKKLGQKAAEYEDLVQQ 979
              ..|.||.:..: .|:..|..:....|::.|...|. ..|:|:|:...:.||:        :::
Zfish   880 LDMSARLELQSALDTEIRAKQSIQDELNKVKATNIATECKLQESESRNQELLGE--------IER 936

  Fly   980 HKKQQEELALMRSSKDEEITKLLDKCKNEVLLKQVAVNKLAEVMNRRDSDLPKQKNKARSTAEL- 1043
            .:|:.|||.|.|..|.::       .:|..|....|.....:..:|..|..|..|.:...:|:. 
Zfish   937 LRKETEELRLRRGVKHQD-------SQNSFLAFLNAPTSALDQFDRSPSFGPGSKTRRLDSADFT 994

  Fly  1044 ------RKKEKEMRRLQQ-------------EL----------------------SQERDKFNQL 1067
                  |.::...||:.:             ||                      |..:.|.:|.
Zfish   995 PSNTPSRDEDARSRRISRSRSPSTASDMEPIELIDHTSRSLQTPTGRSGYGSLGHSSPKPKAHQF 1059

  Fly  1068 LLKHQDLQQLCAEEQQLKQKMVME-IDCKATEIENLQSKLNETASLSSADNDPE------DSQHS 1125
            .:|..::...|.:...|...::.: ..|:|...         :..::.||..|.      |....
Zfish  1060 SVKSFNVPTKCNQCTSLMVGLIRQGCTCEACSF---------SCHVTCADKAPSVCPVAPDQTRG 1115

  Fly  1126 SLLSLTQDSV---FEGWLSVPNKQNRRRGHGWKRQYVIVSSRKIIFYNSDIDKHNTTDAVL--IL 1185
            .|...||..:   :||.|.||.....::  ||:|.:.:|...|:..|.....|......|:  ::
Zfish  1116 KLGIDTQRGIGTAYEGHLRVPKPTGVKK--GWQRVWAVVCDFKLFLYELGEGKGAQPGVVVNQVI 1178

  Fly  1186 DL-SKVYHVRSVTQGDVIRADAKEIPRIFQLLYAGEGASHRPDEQSQLDVSVLHGNC------NE 1243
            |: .:.:...||.:.|||.|:.|:||.||::            ..|||..|.....|      ||
Zfish  1179 DMRDEEFSASSVLESDVIHANRKDIPCIFRV------------TASQLSASSSQKTCILILADNE 1231

  Fly  1244 E 1244
            :
Zfish  1232 Q 1232

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RokNP_536796.2 STKc_ROCK 61..411 CDD:270747 181/363 (50%)
S_TKc 87..349 CDD:214567 142/272 (52%)
SbcC 484..1088 CDD:223496 140/700 (20%)
Rho_Binding 963..1027 CDD:286056 13/63 (21%)
PH_ROCK 1134..1250 CDD:269948 32/123 (26%)
C1 1254..1307 CDD:197519
cdc42bpabXP_021324156.1 STKc_MRCK_alpha 4..419 CDD:270773 197/434 (45%)
SbcC 438..>945 CDD:223496 126/580 (22%)
KELK 535..613 CDD:318090 25/89 (28%)
DMPK_coil 887..947 CDD:117396 15/67 (22%)
C1_1 1057..1107 CDD:278556 9/58 (16%)
PH_MRCK 1117..1251 CDD:269949 35/130 (27%)
CNH 1277..1539 CDD:307087
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D759391at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.920

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