DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Rok and stk38l

DIOPT Version :9

Sequence 1:NP_536796.2 Gene:Rok / 43916 FlyBaseID:FBgn0026181 Length:1390 Species:Drosophila melanogaster
Sequence 2:NP_001006753.1 Gene:stk38l / 448427 XenbaseID:XB-GENE-5881027 Length:464 Species:Xenopus tropicalis


Alignment Length:431 Identity:160/431 - (37%)
Similarity:240/431 - (55%) Gaps:65/431 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 ERRRRANTLEREMRDPTSICNVDCLLDTVSALVSDCDHESLRRLKNIEQYAAKYKPLAMQINQLR 81
            ||..|...||..|.:       :.|.|         |.:.:||    .|:|.|.... :::.:.|
 Frog    41 ERETRQKKLEVAMEE-------EGLGD---------DEKKMRR----SQHARKETEF-LRLKRTR 84

  Fly    82 MNVEDFHFIKLIGAGAFGEVQLVRHKSSSQVYAMKRLSKFEMMKRPDSAFFWEERHIMAHANSEW 146
            :.:|||..:|:||.||||||:||:.|.:..:||||.|.|.:|:::...|....||.|:..|:..|
 Frog    85 LGLEDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAW 149

  Fly   147 IVQLHFAFQDAKYLYMVMDFMPGGDIVSLMGDYD-IPEKWAIFYTMEVVLALDTIHNMGFVHRDV 210
            :|::.::|||.:.||::|:|:||||:::|:...| :.|:...||..|.|||:|.||.:||:|||:
 Frog   150 VVKMFYSFQDKRNLYLIMEFLPGGDMMTLLMKKDTLTEEATQFYIAETVLAIDAIHQLGFIHRDI 214

  Fly   211 KPDNMLLDSYGHLKLADFGTC-------------------------MRMGA---------NGQVV 241
            ||||:|||:.||:||:|||.|                         ..|.:         |.:.:
 Frog   215 KPDNLLLDAKGHVKLSDFGLCTGLKKAHRTEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQL 279

  Fly   242 SSNAVGTPDYISPEVLQSQGVDNEYGRECDWWSVGIFLYEMLFGETPFYADSLVGTYGKIMDHKN 306
            :.:.|||||||:|||....|    |.:.|||||:|:.:||||.|..||.:::...||.|:|:.|.
 Frog   280 AYSTVGTPDYIAPEVFMQTG----YNKLCDWWSLGVIMYEMLIGYPPFCSETPQETYRKVMNWKE 340

  Fly   307 SLSFPPEVEISEQAKALIRAFLTDRTQRLGRYGIEDIKAHPFFRNDTWSFDNIRESVPPVVP-EL 370
            :|.|||||..||::|.||..|..|...|:|..|:|:||:||||....|.  :|||. |..:| |:
 Frog   341 TLVFPPEVPTSEKSKDLILRFCADSENRVGSNGVEEIKSHPFFEGVDWG--HIRER-PAAIPIEI 402

  Fly   371 SSDDDTRNFEDIERDEKPEEVFPVPK-GFDGNHLPFIGFTY 410
            .|.|||.||::....:..:.|...|: .:......|:.:||
 Frog   403 KSIDDTSNFDEFPESDILQPVLNPPEPDYKSKDWVFLNYTY 443

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RokNP_536796.2 STKc_ROCK 61..411 CDD:270747 149/387 (39%)
S_TKc 87..349 CDD:214567 123/296 (42%)
SbcC 484..1088 CDD:223496
Rho_Binding 963..1027 CDD:286056
PH_ROCK 1134..1250 CDD:269948
C1 1254..1307 CDD:197519
stk38lNP_001006753.1 STKc_NDR2 87..452 CDD:270776 145/364 (40%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D759391at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

Return to query results.
Submit another query.