DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Rok and sti

DIOPT Version :9

Sequence 1:NP_536796.2 Gene:Rok / 43916 FlyBaseID:FBgn0026181 Length:1390 Species:Drosophila melanogaster
Sequence 2:NP_001261768.1 Gene:sti / 39429 FlyBaseID:FBgn0002466 Length:1858 Species:Drosophila melanogaster


Alignment Length:1516 Identity:386/1516 - (25%)
Similarity:681/1516 - (44%) Gaps:352/1516 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 SICNVDCLLDTVSALVSDCDHESL-RRLKNIEQYAAKYKPLAMQINQLRMNVEDFHFIKLIGAGA 97
            :||. :.|||....|.::||.::| :|.:||.::..|::|:..:..:||:|.:||....|||.|.
  Fly    60 AICR-EGLLDAFCLLYNECDKDTLKKRDRNIAEFVNKFRPIIEETRKLRVNADDFLIKTLIGQGY 123

  Fly    98 FGEVQLVRHKSSSQVYAMKRLSKFEMMKRPDSAFFWEERHIMAHANSEWIVQLHFAFQDAKYLYM 162
            ||.|.||..:.::.:||||::.|..:    .::...|||.||:..||||::.|.:||||...||:
  Fly   124 FGNVHLVVERQTNDIYAMKKIKKSVV----TTSQVKEERDIMSIRNSEWLINLQYAFQDNDNLYL 184

  Fly   163 VMDFMPGGDIVSLM---GDYDIPEKWAIFYTMEVVLALDTIHNMGFVHRDVKPDNMLLDSYGHLK 224
            ||::|||||::|||   |.:|  |..|.||..|:.:||.|:|.||:||||:||:|:|:|.:||:|
  Fly   185 VMEYMPGGDLLSLMSRHGPFD--EDLARFYLAELTVALHTLHEMGYVHRDIKPENILIDRFGHIK 247

  Fly   225 LADFGTCMRMGANGQVVSSNAVGTPDYISPEVLQ-------SQGVDNEYGR--ECDWWSVGIFLY 280
            |||||....:..:|.|:|.:.|||||||:||:||       |:.: ::..|  .||:||:||..|
  Fly   248 LADFGNAAALDRDGHVLSLSPVGTPDYIAPELLQTISTYKLSKSM-HDVSRIVSCDYWSMGIIGY 311

  Fly   281 EMLFGETPFYADSLVGTYGKIMDH------KNSLSFPPEVEISEQAKALIRAFLTDRTQRLGRYG 339
            |::...|||:.|::..||.||:.|      |..:|||.::::|...:.||.:.:|:.::||   .
  Fly   312 ELICETTPFHEDNVHETYSKILSHCEESHLKELISFPADLKVSVNYRNLIESLVTNPSKRL---S 373

  Fly   340 IEDIKAHPFFRNDTWSFDNIRESVPPVVPELSSDDDTRNFEDIERDEKPEEVFPVPKG------- 397
            .|.||.||||....|.  :||..|||::|.:.|||||.||||..|.:...|.....|.       
  Fly   374 YERIKNHPFFSEIPWG--SIRSQVPPIIPTVRSDDDTSNFEDGIRHKTRREQGVAKKSLTTNMKS 436

  Fly   398 --FDGNHLPFIGFTYT------------------------------GDYQLLSSDTVDA------ 424
              |.|..|||||:::.                              .:..:|..|.:.|      
  Fly   437 NDFSGKDLPFIGYSFVHMEKSAISATTDEKLQEKLKELLQKLKTRENEISMLKQDLLRAQQSLRK 501

  Fly   425 -ESKEANVANSGAASNNHGHGHNHRHRPSNSNELKRLEALLERERGRSEALEQQDAGLRQQI--- 485
             ::|...||::                   ..|:|:|:.:::.:.......:.|...|:...   
  Fly   502 TDNKSQVVADA-------------------KMEIKKLQQIIKEKTMELTTCKTQIKTLQSSAKID 547

  Fly   486 -ELITKREA-------------ELQRIASE--YEKDLALRQHNYKVAMQKVE-QEIELRKKTEA- 532
             |:.:|:||             |..:||||  |||.||.::......:||:: :|:|...|.|. 
  Fly   548 EEMWSKKEATITDLLRLNRQKYEEAKIASEQRYEKQLADKKQELASTLQKLDARELEFNAKFEEC 612

  Fly   533 --LLVETQ-----------RNLEN-----EQKTRARDLNINDKVVSLEKQLLEMEQSYKTETENT 579
              |.::.|           :||::     ||:.:..:| ...|:..|.|   ::..|..|....|
  Fly   613 KHLSMKLQNYKDMLQQIKEQNLKSETNHEEQRRQMAEL-YEQKLTDLRK---KVRDSQDTNRRMT 673

  Fly   580 QKLKKHNAELDFTVKS----QEEKVRDMVDMIDTLQKHKEELGQENAELQALVVQEKNLRSQLKE 640
            .::|:...|||.::.|    ||.|.....::.:.|::..||:...| ||.|..|:.:. :.||||
  Fly   674 MEIKEIRTELDESISSSKSTQEAKNATERNIEEILRRLNEEIASNN-ELHAEKVKLET-KLQLKE 736

  Fly   641 MH-KEAENKMQTLINDIERTMCREQKAQEDNRALLEKISDLEKAHAGLDFELKAAQGRYQQEVKA 704
            .. :|...:...|..:::...||.|.|:.   :|..::|..|.|...|. ||.|.:.:.:.::.|
  Fly   737 NETQEVRAECHRLERELQLAECRCQLAES---SLATQVSPYETAPGSLT-ELNAIEDQLRADLLA 797

  Fly   705 HQETEKSRLVSREEANLQEVKALQSKL-------NEEKSARIKADQHS---QEKERQLSMLSVDY 759
            .:|:|     :.::....:::.|.:||       ||:..:..|:  ||   ||.|....||....
  Fly   798 AKESE-----NHQKGRADQLQTLVTKLEQMLERFNEQSLSPTKS--HSSRKQEGETVGDMLERQN 855

  Fly   760 RQIQLRLQKLEGE--CRQESEKVAAL-----QSQLDQEHSKRNALLSELSLHSSEVAHLRSRENQ 817
            .:::.:|..:..:  ..:::.:.|.|     :.||::..|::..|...:.|....:..:::..::
  Fly   856 EKLEDKLAAVREQMIVERQAARTANLSLWKVEKQLEEALSEKKLLARRMELTEDRIKKVQNASDE 920

  Fly   818 LQKELSTQREAKR----RFEEDLTQLKSTHHEALANNRELQ-AQLEAEQCFSRLYKTQANENREE 877
            .|:.|.|.:|..|    |.||...:|.:...:.|..:|:.: |:.|..:|            :.|
  Fly   921 AQRMLKTSQEETRQRESRIEELKQELAAAKRDVLKEHRQWEKAEQERMKC------------KSE 973

  Fly   878 SAERLSKIEDLEEERVSLKHQVQVAVARADSEALARSIAEETVADL--EKEKTIK--------EL 932
            ..|.|:.:..||::...|:.:::...:|.|...|.:   :.|:.:|  |:||:.|        :.
  Fly   974 IIEHLANVHRLEQQETELRQKLRQIQSRFDGVTLEQ---KNTIRELQEEREKSRKANDSCLVLQK 1035

  Fly   933 ELKDFV-----MKHRNEI-NAKEAALATLKEAENE-----------LHKKLGQKAAEYEDL---- 976
            |||...     :|:...| :::...:.|:.::|.|           ||:||.::..:..||    
  Fly  1036 ELKQLTDNFQRLKYACSITDSQLTEVETMLKSEQERNKSQKSQLDTLHEKLRERNDQLTDLRKQL 1100

  Fly   977 --VQQHKKQQEELALMRSSKDEEITKLLDKCKNEVLLKQ----------VAVNKLAEVMNRRDSD 1029
              |:..|:..|:.|.:.:|:.:|:...|.:.:.:::.:|          .|..:.||:::.::::
  Fly  1101 TTVESEKRLAEQRAQVLASEIDELRLNLKEQQKKLVAQQDQLVEQTNALFATQERAELLDGQNAN 1165

  Fly  1030 LPKQ------------KNKARSTAELRKKEKEMRRLQQELSQERDKFNQLLLKHQDLQQLCAEEQ 1082
            ...|            :..||..:||..|::|:..||.|:.........|..:...||...||::
  Fly  1166 YEAQTADSNREMVSLKEENARILSELFHKKEEVGNLQAEIRGLESAQANLHAEIDSLQDTLAEKE 1230

  Fly  1083 Q------LKQKMVME-----IDCKATEIENLQSKLNET-------ASLSSADN-DPEDSQHSSLL 1128
            |      :|....:.     ||....::|:|.:|..:|       :|.::.:| .|.|.:.|.|.
  Fly  1231 QFYVQRDIKSNATLAQHKKLIDYLQLKVEDLSAKKKKTLADKLFGSSHTNKENVSPNDVESSILY 1295

  Fly  1129 SLTQDSVFEGWLSVPNKQNRRRGHGWKRQYVIVSSRKIIFYNSDIDKHNTTDAVLILDLSKVYHV 1193
            ...::.:                   ||:                .|.|:.....:..|:....:
  Fly  1296 RALKEEL-------------------KRE----------------QKMNSLLKEQLAQLNGTATL 1325

  Fly  1194 RSVTQGDVIRADAKEIPRIFQLLYAGEGASHRPDEQ------SQLDVSVLHGNCNEERPG--TIV 1250
            ||..:...:..|: :.|:...:..|....|.:..:|      ||:::..     ..|:|.  ||.
  Fly  1326 RSPRKSAAVNGDS-DAPKQRPVSIAALPRSPQKQQQPLKRTTSQVELKT-----TAEKPTKVTIE 1384

  Fly  1251 HKGHEFVHITYHMPTA----CEVCPK------PLWHMFKPPAAYECKRCRNKIHKE-------HV 1298
            ::.|....:.......    |.||.|      |.|         :||.|::..|::       |.
  Fly  1385 NQAHHRFELALQESKVDAVNCVVCEKAVVAGSPFW---------KCKECKDVTHRKCRSNVQSHC 1440

  Fly  1299 DKHDPLAPCKLNHDPRSARDM 1319
            ....|.||        ||.|:
  Fly  1441 GSTKPTAP--------SADDL 1453

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RokNP_536796.2 STKc_ROCK 61..411 CDD:270747 155/376 (41%)
S_TKc 87..349 CDD:214567 119/279 (43%)
SbcC 484..1088 CDD:223496 162/730 (22%)
Rho_Binding 963..1027 CDD:286056 16/79 (20%)
PH_ROCK 1134..1250 CDD:269948 17/123 (14%)
C1 1254..1307 CDD:197519 14/69 (20%)
stiNP_001261768.1 PKc_like 111..452 CDD:304357 148/352 (42%)
S_TKc 113..383 CDD:214567 119/279 (43%)
Smc 487..1222 CDD:224117 167/785 (21%)
CNH 1503..1774 CDD:279162
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45442198
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0612
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D6806at6656
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR22988
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
54.850

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