DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Rok and stk38l

DIOPT Version :9

Sequence 1:NP_536796.2 Gene:Rok / 43916 FlyBaseID:FBgn0026181 Length:1390 Species:Drosophila melanogaster
Sequence 2:XP_005164924.1 Gene:stk38l / 393957 ZFINID:ZDB-GENE-040426-798 Length:464 Species:Danio rerio


Alignment Length:423 Identity:155/423 - (36%)
Similarity:243/423 - (57%) Gaps:58/423 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 EREMRDP--TSICNVDCLLDTVSALVSDCDHESLRRLKNIEQYAAKYKPLAMQINQLRMNVEDFH 88
            |||||..  ..:.:.:.|.|         :.:|:||     ...|:.:...:::.:.|:.::||.
Zfish    41 EREMRQKKLEKVMDEEGLPD---------EEKSMRR-----SLHARKETEFLRLKRTRLGLDDFE 91

  Fly    89 FIKLIGAGAFGEVQLVRHKSSSQVYAMKRLSKFEMMKRPDSAFFWEERHIMAHANSEWIVQLHFA 153
            .:|:||.||||||:||:.|.:..:||||.|.|.:|:::...|....||.|:..|:..|:|::.::
Zfish    92 SLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYS 156

  Fly   154 FQDAKYLYMVMDFMPGGDIVSLMGDYD-IPEKWAIFYTMEVVLALDTIHNMGFVHRDVKPDNMLL 217
            |||.:.||::|:|:||||:::|:...| :.|:...||..|.|||:|:||.:||:|||:||||:||
Zfish   157 FQDKRNLYLIMEFLPGGDMMTLLMKKDTLSEEATQFYIAETVLAIDSIHQLGFIHRDIKPDNLLL 221

  Fly   218 DSYGHLKLADFGTC-------------------------MRMGA---------NGQVVSSNAVGT 248
            ||.||:||:|||.|                         ..|.:         |.:.::.:.|||
Zfish   222 DSRGHVKLSDFGLCTGLKKAHRTEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGT 286

  Fly   249 PDYISPEVLQSQGVDNEYGRECDWWSVGIFLYEMLFGETPFYADSLVGTYGKIMDHKNSLSFPPE 313
            ||||:|||....|    |.:.|||||:|:.:||||.|..||.:::...||.|:|:.:.:|:||||
Zfish   287 PDYIAPEVFMQTG----YNKLCDWWSLGVIMYEMLIGYPPFCSETPQETYRKVMNWRETLTFPPE 347

  Fly   314 VEISEQAKALIRAFLTDRTQRLGRYGIEDIKAHPFFRNDTWSFDNIRESVPPVVPELSSDDDTRN 378
            |.|||:||.||..:.||...|:|...:::||:||||.:..|  ::|||....:..::.|.|||.|
Zfish   348 VPISERAKELILRYCTDAENRIGSGSVDEIKSHPFFESVDW--EHIRERPAAISIDIKSIDDTSN 410

  Fly   379 FEDIERDEKPEEVFPVPKG-FDGNHLPFIGFTY 410
            |:|....:..:.|..|.:. |......|:.:||
Zfish   411 FDDFPESDILQPVANVTESDFKSKDWVFLNYTY 443

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RokNP_536796.2 STKc_ROCK 61..411 CDD:270747 145/386 (38%)
S_TKc 87..349 CDD:214567 123/296 (42%)
SbcC 484..1088 CDD:223496
Rho_Binding 963..1027 CDD:286056
PH_ROCK 1134..1250 CDD:269948
C1 1254..1307 CDD:197519
stk38lXP_005164924.1 STKc_NDR2 87..452 CDD:270776 143/363 (39%)
S_TKc 90..383 CDD:214567 123/296 (42%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D759391at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.920

Return to query results.
Submit another query.