DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Rok and gek

DIOPT Version :9

Sequence 1:NP_536796.2 Gene:Rok / 43916 FlyBaseID:FBgn0026181 Length:1390 Species:Drosophila melanogaster
Sequence 2:NP_523837.2 Gene:gek / 37858 FlyBaseID:FBgn0023081 Length:1637 Species:Drosophila melanogaster


Alignment Length:1340 Identity:372/1340 - (27%)
Similarity:617/1340 - (46%) Gaps:278/1340 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 NVDCLLDTVSALVSDCDHESLRRLKNIEQYAAKYKPLAMQINQLRMNVEDFHFIKLIGAGAFGEV 101
            ::|.||||...|..:|.:.||||.|.:..:....||....:.:||::.:||..:|:||.||||||
  Fly    50 SLDYLLDTFIVLYDECSNSSLRREKGVSDFLKLSKPFVHIVRKLRLSRDDFDILKIIGRGAFGEV 114

  Fly   102 QLVRHKSSSQVYAMKRLSKFEMMKRPDSAFFWEERHIMAHANSEWIVQLHFAFQDAKYLYMVMDF 166
            .:|:..|:.:|||||.|:|:||:||.::|.|.|||.::...:.:||..||:||||...||:|||:
  Fly   115 CVVQMISTEKVYAMKILNKWEMLKRAETACFREERDVLVFGDRQWITNLHYAFQDNINLYLVMDY 179

  Fly   167 MPGGDIVSLMGDYD--IPEKWAIFYTMEVVLALDTIHNMGFVHRDVKPDNMLLDSYGHLKLADFG 229
            ..|||:::|:..::  :||..|.||..|::||:::||.:.:||||:||||:|||..||::|||||
  Fly   180 YCGGDLLTLLSKFEDKLPEDMAKFYITEMILAINSIHQIRYVHRDIKPDNVLLDKRGHVRLADFG 244

  Fly   230 TCMRMGANGQVVSSNAVGTPDYISPEVLQS-QGVDNEYGRECDWWSVGIFLYEMLFGETPFYADS 293
            :|:|:..:|.|.|:.|||||||||||:|:: :.....||.||||||:|:.:||||:|||||||:|
  Fly   245 SCLRLDKDGTVQSNVAVGTPDYISPEILRAMEDGKGRYGTECDWWSLGVCMYEMLYGETPFYAES 309

  Fly   294 LVGTYGKIMDHKNSLSFPPE----VEISEQAKALIRAFLTDRTQRLGRYGIEDIKAHPFFRNDTW 354
            ||.||||||:|:|..:.|.:    .::||.::.|:...:.....|||:.||:|...||:|....|
  Fly   310 LVETYGKIMNHQNCFNLPSQETLNYKVSETSQDLLCKLICIPENRLGQNGIQDFMDHPWFVGIDW 374

  Fly   355 SFDNIRESVPPVVPELSSDDDTRNFEDIERDEKPEEVFP--VPKGFDGNHLPFIGFTYTGDYQLL 417
            .  |||:...|.|||:||..||.||:..:.|.:..:..|  ....|.|.||||||||::    |.
  Fly   375 K--NIRQGPAPYVPEVSSPTDTSNFDVDDNDVRLTDSIPPSANPAFSGFHLPFIGFTFS----LT 433

  Fly   418 SSDTVDAESKEANVANSGAASNNHGHG----------------HNHRHRPSNSNELKRLEALLER 466
            ||.|:|::..:::           |.|                .|:...|.:|.:||        
  Fly   434 SSSTLDSKKNQSS-----------GFGDDTLDTISSPQLAILPSNNSETPVDSVQLK-------- 479

  Fly   467 ERGRSEALEQQDAGLRQQIELITKREAELQRIASEYEKDLALRQHNYKVAMQKVEQEIELRKKTE 531
                  ||..|.|.|:|:       :|||.            :|||          |:..|.||:
  Fly   480 ------ALNDQLAALKQE-------KAELS------------KQHN----------EVFERLKTQ 509

  Fly   532 ALLVETQRNLENEQKTRARDLNINDKVVSLEKQLLEMEQSYKTETENTQKLKKHNAELDFTVKSQ 596
                               |..:.|.:  .::.:..||  |...||...:|:....:|...|:.:
  Fly   510 -------------------DSELQDAI--SQRNIAMME--YSEVTEKLSELRNQKQKLSRQVRDK 551

  Fly   597 EEKVRDMVDMIDTLQ---------KHKEELGQENAELQALVVQEKNLRSQLKEMHKEAENKMQTL 652
            ||::...:...|:|:         :.:.||..|:|.::|  .:||.||...::..::.:.:::..
  Fly   552 EEELDGAMQKNDSLRNELRKSDKTRRELELHIEDAVIEA--AKEKKLREHAEDCCRQLQMELRKG 614

  Fly   653 INDIERTMCREQKAQEDNRALLEKISDLEKAHAGLDFELKAAQGRYQQEVKAHQETEKSRLVSRE 717
            .:.:|.||         ..::..::|..|.....|.|          .|..:||:|..:      
  Fly   615 SSSVETTM---------PLSISSEMSSYEIERLELQF----------SEKLSHQQTRHN------ 654

  Fly   718 EANLQEVKALQSKLNEEKSARIKADQHSQEKERQLSMLSVDYRQIQLRLQKLEGECRQESEKVAA 782
                .|::||:.:.:|.::|.:...:..|:.:.:|.     |.|::        .....:|.:..
  Fly   655 ----MELEALREQFSELENANLALTKELQQTQERLK-----YTQME--------SITDSAETLLE 702

  Fly   783 LQSQLDQEHS----KRNALLSELSLHSSEVAHLRSRENQLQKELSTQREAKRRFEE---DLTQLK 840
            |:.|.|.|.|    ::..|.||::|.|..:..|::.::::.|||..:|||...:|.   ::.|..
  Fly   703 LKKQHDLEKSSWFEEKQRLSSEVNLKSKSLKELQAEDDEIFKELRMKREAITLWERQMAEIIQWV 767

  Fly   841 STHHEALANNRELQAQLEAEQCFSRLYKTQANEN------REESAERLSKIEDLEEERVSLKHQV 899
            |...:|....:.|..::..|..:.:...|..|..      |...:::|.|:|.|..:. :|:.::
  Fly   768 SDEKDARGYLQALATKMTEELEYLKHVGTFNNNGVDNKNWRNRRSQKLDKMELLNLQS-ALQREI 831

  Fly   900 QVAVARADSEALARSIAEETVADLEKEKTIKELELKDFVMKHRNEINAKEAALATLKEAENELHK 964
            |.....:|..:..||....|..::...|...:..|.||   .:.|...::.....|:.:|:.|:|
  Fly   832 QAKNMISDELSQTRSDLISTQKEVRDYKKRYDSILHDF---QKKETELRDLQKGGLEYSESFLNK 893

  Fly   965 KL--GQKAAEYEDLVQQHKKQQEELALMRSSKDEEITKLLDKCKNE----------------VLL 1011
            ..  |..:|.:.|:                ||:.||....:...||                :|.
  Fly   894 STHHGLSSAFFRDM----------------SKNSEIIDSAESFGNESGDNFTPNFFQSGNSGMLF 942

  Fly  1012 KQVAVNKLAEVMNRRDSDLPKQKNKARSTAELRKKEKEMRRLQQELSQERDK-------FNQLLL 1069
            ....  |.|...|:..|.:     |..|.::|.::|.:      :|.:|..|       .:|.|:
  Fly   943 NYEP--KYAGKNNKDHSSM-----KEASVSDLSREESD------QLVKESQKKVPGNTAIHQFLV 994

  Fly  1070 KHQDLQQLCAEEQQL-----KQKMVMEIDCKATEIENLQSKLNETASLSSADNDPEDSQHSSL-L 1128
            :.......|.....|     :|.:|.||...|......| |:..|..:      |.|.....| :
  Fly   995 RTFSSPTKCNHCTSLMVGLTRQGVVCEICGFACHTICCQ-KVPTTCPV------PMDQTKRPLGI 1052

  Fly  1129 SLTQ--DSVFEGWLSVPNKQNRRRGHGWKRQYVIVSSRKIIFYNSDIDK--HNTTDAVLILDL-S 1188
            ..|:  .:.:||::.||.....:|  ||.||:|:|...|:..|:...|:  ..:.....:||: .
  Fly  1053 DPTRGIGTAYEGYVKVPKSGVIKR--GWIRQFVVVCDFKLFLYDISPDRCALPSVSVSQVLDMRD 1115

  Fly  1189 KVYHVRSVTQGDVIRADAKEIPRIFQLLYAGEGASHRPDEQSQLDVSVLHGNCNEER-------- 1245
            ..:.|.||.:.|||.|..|::|.||::..|      ..|....|:..:|..|.:|:.        
  Fly  1116 PEFSVGSVRESDVIHAAKKDVPCIFKIKTA------LIDGGLSLNTLMLADNESEKSKWVIALGE 1174

  Fly  1246 ----------PGTIVHKGHEFVHITYHM--PTACEVCPKP 1273
                      |.|.:.|.:|.:..|..:  ...|.|...|
  Fly  1175 LHRILKRNSLPNTAIFKVNEILDNTLSLIRNALCSVIIYP 1214

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RokNP_536796.2 STKc_ROCK 61..411 CDD:270747 166/358 (46%)
S_TKc 87..349 CDD:214567 133/268 (50%)
SbcC 484..1088 CDD:223496 125/655 (19%)
Rho_Binding 963..1027 CDD:286056 14/81 (17%)
PH_ROCK 1134..1250 CDD:269948 35/136 (26%)
C1 1254..1307 CDD:197519 5/22 (23%)
gekNP_523837.2 STKc_DMPK_like 98..430 CDD:270748 160/333 (48%)
S_TKc 100..369 CDD:214567 133/268 (50%)
KELK 478..556 CDD:292424 30/143 (21%)
CEP63 492..749 CDD:293650 68/345 (20%)
CEP63 652..880 CDD:293650 51/254 (20%)
C1_1 990..1040 CDD:278556 12/50 (24%)
PH_MRCK 1049..1182 CDD:269949 35/140 (25%)
CNH 1211..1486 CDD:279162 1/4 (25%)
CRIB 1544..1580 CDD:238077
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45442197
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0612
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D36525at33392
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR22988
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
54.850

Return to query results.
Submit another query.