DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rok and Cdc42bpg

DIOPT Version :9

Sequence 1:NP_536796.2 Gene:Rok / 43916 FlyBaseID:FBgn0026181 Length:1390 Species:Drosophila melanogaster
Sequence 2:XP_038964401.1 Gene:Cdc42bpg / 293693 RGDID:1307260 Length:1558 Species:Rattus norvegicus


Alignment Length:1497 Identity:394/1497 - (26%)
Similarity:618/1497 - (41%) Gaps:454/1497 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 VERRRRANTLEREMR-DPTSICNVDCLLDTVSALVSDCDHESLRRLKNIEQYAAKYKPLAMQINQ 79
            :|:|.||  ||:.:| :......:|.|||.:..:..:.....|||.:|:.|:.:...|...::.:
  Rat     1 MEQRLRA--LEQLVRGEAGGSPGLDGLLDLLLGVHQELSSAPLRRERNVAQFLSWAGPFVTKVKE 63

  Fly    80 LRMNVEDFHFIKLIGAGAFGEVQLVRHKSSSQVYAMKRLSKFEMMKRPDSAFFWEERHIMAHANS 144
            ||:..:||..:|:||.||||||.:||.:.|.|::|||.|.|:||:||.::|.|.|||.::...:|
  Rat    64 LRLQRDDFEILKVIGRGAFGEVAVVRQRDSGQIFAMKMLHKWEMLKRAETACFREERDVLVKGDS 128

  Fly   145 EWIVQLHFAFQDAKYLYMVMDFMPGGDIVSLMGDYD--IPEKWAIFYTMEVVLALDTIHNMGFVH 207
            .|:..||:||||.:|||:|||:..|||:::|:..::  :|.:.|.||..|:|||:.::|.:|:||
  Rat   129 RWVTALHYAFQDEEYLYLVMDYYAGGDLLTLLSRFEDRLPPELAQFYLAEMVLAIHSLHQLGYVH 193

  Fly   208 RDVKPDNMLLDSYGHLKLADFGTCMRMGANGQVVSSNAVGTPDYISPEVLQS--QGVDNEYGREC 270
            |||||||:|||..||::|||||:|:|:..||.|.||.|||||||||||:||:  :| ...||.:|
  Rat   194 RDVKPDNILLDMNGHIRLADFGSCLRLNNNGMVDSSVAVGTPDYISPEILQAMEEG-KGHYGPQC 257

  Fly   271 DWWSVGIFLYEMLFGETPFYADSLVGTYGKIMDHKNSLSFPPEV-EISEQAKALIRAFLTDRTQR 334
            ||||:|:..||:|||||||||:|||.||||||:|::.|.||.:| ::...|:||||..|..:.:|
  Rat   258 DWWSLGVCAYELLFGETPFYAESLVETYGKIMNHEDHLQFPSDVDDVPASAQALIRQLLCRQEER 322

  Fly   335 LGRYGIEDIKAHPFFRNDTWSFDNIRESVPPVVPELSSDDDTRNFEDIERD--EKPEEVFPVPKG 397
            |||.|::|.::||||....|  :.:..|..|.:|||....||.|| |::.|  .:||.:.|...|
  Rat   323 LGRGGLDDFRSHPFFEGVDW--ERLATSTAPYIPELRGPVDTSNF-DVDDDTLNRPETLPPSSHG 384

  Fly   398 -FDGNHLPFIGFTYTGDYQLLSSDTVDAESKEANVANSGAASNNHGHGHNHRHRPSNSNELKRLE 461
             |.|:||||:|||||      |....|.:|.|                                 
  Rat   385 AFSGHHLPFVGFTYT------SGSLTDDKSSE--------------------------------- 410

  Fly   462 ALLERERGRSEALEQQDAGLRQQIELITKREAELQRIASEYEKDLALRQHNYKVAMQKVEQEIEL 526
             |:.....:...:||                                             .::||
  Rat   411 -LMATPEWKPHGVEQ---------------------------------------------MKVEL 429

  Fly   527 RKKTEA--LLVETQRNLENEQKTRARDLNINDKVVSLEKQLLEMEQSYKTETENTQKLKKHNAEL 589
            .:|.:.  ||.|...:....|           ::|.|:|: :::.|...|||....|.....|: 
  Rat   430 SQKCQVALLLPEALHSSLQPQ-----------ELVRLQKE-VQVLQEKLTETLRDSKASLSQAD- 481

  Fly   590 DFTVKSQEEKVRDMVDMIDTLQKHKEELGQENAELQALVVQEKNLRSQLKEMHKEAENKMQTLIN 654
            ...|:|....::        ||:.|:.|.||.||.||.:                       .:.
  Rat   482 GLHVRSPAPDIQ--------LQQEKDRLQQELAEAQAAL-----------------------QVR 515

  Fly   655 DIERTMCREQKAQEDNRALLEKISDLEKAHAGLDFELKAAQGRYQQEVKAHQETEKSRLVSREEA 719
            |.|  :|:.|..||:                            :.|.:...||        ||.|
  Rat   516 DAE--LCQAQNRQEE----------------------------FLQRLWEAQE--------REAA 542

  Fly   720 NLQEVKALQSKLNEEKSARIKADQHSQEKERQLSMLSVDYRQIQLRLQKLEGECRQESEKVAALQ 784
            ...:::||.|:|.|....|       :|.|.|::.||.:..|:|       |:|:|:|      .
  Rat   543 AASQIQALNSQLEEAWVVR-------RELEGQVNTLSQEVTQLQ-------GQCKQDS------S 587

  Fly   785 SQLDQEHS--KRNALLSELSLHSSEVAHLRSRENQLQKELSTQREAKR----------------R 831
            ||....|:  :.|.:.|...         :|:|.||:||::..||...                |
  Rat   588 SQAKTVHAAPETNGIGSPEG---------QSQEAQLRKEVAALREQLECACSQGVNVGKEEVLCR 643

  Fly   832 FEEDLTQLKSTHHEALANNRELQAQLEAEQCFSRLYKTQANENREESAERLSKIEDL----EEER 892
            .:|: .|..|...|.||  .||..:|::.|   ||    ..|.||..:...::|.|:    .:|:
  Rat   644 LQEE-NQRLSREQERLA--EELDLELQSRQ---RL----EGERRESESNWEAQIADILSWVNDEK 698

  Fly   893 VSLKHQVQVAVARADSEALARSIAEETVAD-----------LEKEKTIKELELKDFVMKHRNEIN 946
            ||..:...:|...|:.....|::..:|:..           |:|.:....|||:..:   ..||.
  Rat   699 VSRGYLQALATKMAEELESLRNVGTQTLPTRPLDHQWKARRLQKMEASARLELQSAL---EAEIR 760

  Fly   947 AKEA---ALATLKEAENELHKKLGQKAAEYEDLVQQHKKQQEELALMRSSKDEEITKLLDKCKNE 1008
            ||:.   .|..::||:.:..::|.:...:.:.|.|:..:.:|||........:..|.|:.     
  Rat   761 AKQGLQEQLTQVQEAQRQAERRLQEAEKQNQALQQEVAELREELQARGPGDAKPCTSLIP----- 820

  Fly  1009 VLLKQVAVNKLAEVMNRRDSDLPKQKNKARSTAELRKKEKEMRRLQQELSQERDKFNQLLLKHQD 1073
             ||......|    .:.:|.....:..::.:.||||.:.:...|:.....:..            
  Rat   821 -LLSFWNTEK----DSAKDPGNSGESPRSGAEAELRPEGRRSLRMGSVFPRVP------------ 868

  Fly  1074 LQQLCAEEQQLKQKMVMEIDCKATEIENLQSKLNETASLSSADNDPEDSQHSSLLSL-------- 1130
                               ....|..|...:|.........:...|....|.:.|.|        
  Rat   869 -------------------AANPTPAEGPPAKPGSHTLRPRSFPSPTKCLHCTSLMLGLGRQGLG 914

  Fly  1131 -------------TQ-----------------------DSVFEGWLSVPNKQNRRRGHGWKRQYV 1159
                         ||                       .:.:||:||||.....||  ||:|.|.
  Rat   915 CDTCGYFCHSACATQAPPCPVPPELLRTALGVHPETGTGTAYEGFLSVPRPSGVRR--GWQRVYA 977

  Fly  1160 IVSSRKIIFYNSDIDKHNTTDAVLI--LDL-SKVYHVRSVTQGDVIRADAKEIPRIFQ------- 1214
            .:|..:::.:::...:.:....||:  ||| ...:....|...|||.|.:|::||||:       
  Rat   978 ALSDSRLLLFDAPDPRGSMASGVLLQALDLRDPQFSATPVLAPDVIHAQSKDLPRIFRVTASQLT 1042

  Fly  1215 ---------LLYAGEGASHRPDEQSQLDV-SVLHGNCNEERPGTIVHKGHEFVHITYHMPTACEV 1269
                     ||...||     :.:..|.| |.|.....:.||.                      
  Rat  1043 VPPSTCTVLLLAENEG-----ERERWLQVLSELQRLLLDARPR---------------------- 1080

  Fly  1270 CPKPLWHMFKPPAAYECKRCRNKIHKEHVDKHDPLAP---CKLNHDPRSARDMLLLAATPEDQSL 1331
             |:|::.:                 ||..|...||.|   |....|    |:.|.|..   ::.|
  Rat  1081 -PRPVYTL-----------------KEAYDNGLPLLPHTLCAAIID----RERLALGT---EEGL 1120

  Fly  1332 WVARL----------LKRIQKSGYKAAS--------------------YNNNSTDGSKISPSQST 1366
            :|..|          .:|:|:....:|:                    ..|....|:||..|:..
  Rat  1121 FVIHLHSNDIFQVGDCRRVQRLTVSSAAGLLVVLCGRGPSVRLFTLSELENAEVAGAKIPESRGC 1185

  Fly  1367 RS 1368
            ::
  Rat  1186 QA 1187

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RokNP_536796.2 STKc_ROCK 61..411 CDD:270747 176/357 (49%)
S_TKc 87..349 CDD:214567 143/266 (54%)
SbcC 484..1088 CDD:223496 124/641 (19%)
Rho_Binding 963..1027 CDD:286056 11/63 (17%)
PH_ROCK 1134..1250 CDD:269948 38/135 (28%)
C1 1254..1307 CDD:197519 8/55 (15%)
Cdc42bpgXP_038964401.1 STKc_DMPK_like 69..399 CDD:270748 171/333 (51%)
SMC_prok_B <450..809 CDD:274008 107/482 (22%)
C1_MRCKgamma 885..936 CDD:410416 6/50 (12%)
PH_MRCK 944..1076 CDD:269949 36/138 (26%)
CNH 1103..1366 CDD:395630 16/92 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0612
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D759391at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.820

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