DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Rok and Rock2

DIOPT Version :9

Sequence 1:NP_536796.2 Gene:Rok / 43916 FlyBaseID:FBgn0026181 Length:1390 Species:Drosophila melanogaster
Sequence 2:XP_008762796.1 Gene:Rock2 / 25537 RGDID:3590 Length:1473 Species:Rattus norvegicus


Alignment Length:1468 Identity:631/1468 - (42%)
Similarity:878/1468 - (59%) Gaps:157/1468 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 RANTLEREMRDPTSICNVDCLLDTVSALVSDCDHESLRRLKNIEQYAAKYKPLAMQINQLRMNVE 85
            |...||..:|||.|..||:.|||.:::||.|.|..:||:.|||:.:..:|:.:..:|..|:|..|
  Rat    26 RQRKLEALIRDPRSPINVESLLDGLNSLVLDLDFPALRKNKNIDNFLNRYEKIVKKIRGLQMKAE 90

  Fly    86 DFHFIKLIGAGAFGEVQLVRHKSSSQVYAMKRLSKFEMMKRPDSAFFWEERHIMAHANSEWIVQL 150
            |:..:|:||.||||||||||||:|.:|||||.||||||:||.|||||||||.|||.|||.|:|||
  Rat    91 DYDVVKVIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQL 155

  Fly   151 HFAFQDAKYLYMVMDFMPGGDIVSLMGDYDIPEKWAIFYTMEVVLALDTIHNMGFVHRDVKPDNM 215
            ..||||.:||||||::|||||:|:||.:||:|||||.|||.|||||||.||:||.:|||||||||
  Rat   156 FCAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWAKFYTAEVVLALDAIHSMGLIHRDVKPDNM 220

  Fly   216 LLDSYGHLKLADFGTCMRMGANGQVVSSNAVGTPDYISPEVLQSQGVDNEYGRECDWWSVGIFLY 280
            |||.:||||||||||||:|...|.|....|||||||||||||:|||.|..|||||||||||:||:
  Rat   221 LLDKHGHLKLADFGTCMKMDETGMVHCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLF 285

  Fly   281 EMLFGETPFYADSLVGTYGKIMDHKNSLSFPPEVEISEQAKALIRAFLTDRTQRLGRYGIEDIKA 345
            |||.|:||||||||||||.|||||||||.||.:.|||:.||.||.||||||..||||.|:|:||.
  Rat   286 EMLVGDTPFYADSLVGTYSKIMDHKNSLCFPEDTEISKHAKNLICAFLTDREVRLGRNGVEEIKQ 350

  Fly   346 HPFFRNDTWSFDNIRESVPPVVPELSSDDDTRNFEDIERDEKPEEVFPVPKGFDGNHLPFIGFTY 410
            ||||:||.|::|||||:..|||||||||.|:.||:|||.|:...|.||:||.|.||.||||||||
  Rat   351 HPFFKNDQWNWDNIRETAAPVVPELSSDIDSSNFDDIEDDKGDVETFPIPKAFVGNQLPFIGFTY 415

  Fly   411 TGDYQLLSSDTVDAESKEANVANSGAASNNHGHGHNHRHRPSNSNEL-KRLEALLERERGRSEAL 474
            ..: .||.||:......:|                ....:...|.|: |:|.||.|......:|.
  Rat   416 FRE-NLLLSDSPPCRENDA----------------IQTRKSEESQEIQKKLYALEEHLSSEVQAK 463

  Fly   475 EQQDAGLRQQIELITKREAELQRIASEYEKDLALRQHNYKVAMQKVEQE--------IELRKKT- 530
            |:    |.|:.:.|..|   |::.|.|.|:::..|: |.:..::::|:|        .|.::|. 
  Rat   464 EE----LEQKCKSINTR---LEKTAKELEEEITFRK-NVESTLRQLEREKALLQHKNAEYQRKAD 520

  Fly   531 -EALLVETQRNLENE---QKTRARDLN--------INDKVVSLEKQLLEMEQSYKTETENTQKLK 583
             ||   :.:|||||:   .|.:..||.        ..:||..|:|||.|.....:||::...:|:
  Rat   521 HEA---DKKRNLENDVNSLKDQLEDLKKRNQSSQISTEKVNQLQKQLDEANALLRTESDTAARLR 582

  Fly   584 KHNAELDFTVKSQEEKVRDMVDMIDTLQKHKEELGQENAELQALVVQEKNLRSQLKEMHKEAENK 648
            |..||....::..|...||:.|....|:..|.:|.:|...||:.:..|:..|:...|:..:.:.:
  Rat   583 KTQAESSKQIQQLESNNRDLQDKNCLLETAKLKLEKEFINLQSALESERRDRTHGSEIINDLQGR 647

  Fly   649 MQTLINDIERTMCREQKAQEDNRALLEKISDLEKAHAGLD----FELKAAQGRYQQEVKAHQETE 709
            :..|..|::.......|.:.:.|.|.||::||||..:.::    ::||..|...:|| :|..:|.
  Rat   648 ISGLEEDLKTGKTLLAKVELEKRQLQEKLTDLEKEKSNMEIDMTYQLKVIQQSLEQE-EAEHKTT 711

  Fly   710 KSRLVSR-------EEANLQEVKALQSKLNEEKSARIKADQHSQEKERQLSMLSVDYRQIQLRLQ 767
            |:||..:       |||..:.:|.::.||.||:|.:.|.:....|.|::.|:|..|.:|.|.:|.
  Rat   712 KARLADKNKIYESIEEAKSEAMKEMEKKLLEERSLKQKVENLLLEAEKRCSILDCDLKQSQQKLN 776

  Fly   768 KLEGECRQESEKVAALQSQLDQEHSKRNALLSELSLHSSEVAHLRSRENQLQKELSTQREAKRRF 832
            :|..:....:|.|..|..:::||..||..:.::|.:.:.:|..|:..|.|:::|.:...|.|...
  Rat   777 ELLKQKDVLNEDVRNLTLKIEQETQKRCLMQNDLKMQTQQVNTLKMSEKQIKQENNHLMEMKMNL 841

  Fly   833 EEDLTQLKSTHHEALANNRELQAQLEAEQCFSRLYKTQANENREESAERL-------SKIEDLEE 890
            |:...:|:....:|....:|||.||||||.||.|||||..|.:||:.|:.       .|.:||::
  Rat   842 EKQNAELRKERQDADGQMKELQDQLEAEQYFSTLYKTQVRELKEENEEKTKLCKELQQKKQDLQD 906

  Fly   891 ERVSLKHQVQVAVARADSEALARSIAEETVADLEKEKTIKELELKDFVMKHRNEINAKEAALATL 955
            ||.||..|:::.:.:||||.||||||||..:||||||.:||||:|:.:.:|:.|:..|:|.:|:|
  Rat   907 ERDSLAAQLEITLTKADSEQLARSIAEEQYSDLEKEKIMKELEIKEMMARHKQELTEKDATIASL 971

  Fly   956 KEAENELHKKLGQKAAEYEDLVQQHKKQQEELALMRSSKDEEITKLLDKCK------NEVLLKQV 1014
            :|....|...:...|.|.|:|..:.|..||:|:.:   |||||:....|.:      .|..||..
  Rat   972 EETNRTLTSDVANLANEKEELNNKLKDTQEQLSKL---KDEEISAAAIKAQFEKQLLTERTLKTQ 1033

  Fly  1015 AVNKLAEVMNRRDSDLPKQKNKARSTAELRKKEKEMRRLQQELSQERDKFNQLLLKHQ----DLQ 1075
            |||||||:|||      |:..|..|..::|:||||.|:|..||..||:|..|.::|:|    ::|
  Rat  1034 AVNKLAEIMNR------KEPVKRGSDTDVRRKEKENRKLHMELKSEREKLTQQMIKYQKELNEMQ 1092

  Fly  1076 QLCAEEQQLKQKMVMEIDCKATEIENLQSKLN------ETASLSSADNDPE-------------- 1120
            ...|||.|::.::.|.:|.|.::||.|:|:|.      :::|:.|...|.|              
  Rat  1093 AQIAEESQIRIELQMTLDSKDSDIEQLRSQLQALHIGMDSSSIGSGPGDAEPDDGFPVHITQSHT 1157

  Fly  1121 ------------------------------DSQHSSLLSL-------TQDSVFEGWLSVPNKQNR 1148
                                          ||:..||..|       :.:|..|||||:|.:.|.
  Rat  1158 MESMSFTYQRSSTSLNIATKPSSSHMLLDSDSEEDSLPYLPSSSEPISTESRLEGWLSLPVRNNT 1222

  Fly  1149 RRGHGWKRQYVIVSSRKIIFYNSDIDKHNTTDAVLILDLSKVYHVRSVTQGDVIRADAKEIPRIF 1213
            :: .||.::||||||:||:||:|:.||.. ::..::||:.|::|||.|||.||.|||||||||||
  Rat  1223 KK-FGWVKKYVIVSSKKILFYDSEQDKEQ-SNPYMVLDIDKLFHVRPVTQTDVYRADAKEIPRIF 1285

  Fly  1214 QLLYAGEGASHRPDEQSQLDVSVLHGNCNEERPGTIVHKGHEFVHITYHMPTACEVCPKPLWHMF 1278
            |:|||.||.|.:..|.....|.        |:...|.||||||:...||.||.||.|.|||||||
  Rat  1286 QILYANEGESKKEPEFPVEPVG--------EKSNYICHKGHEFIPTLYHFPTNCEACMKPLWHMF 1342

  Fly  1279 KPPAAYECKRCRNKIHKEHVDKHDP-LAPCKLNHDPRSARDMLLLAATPEDQSLWVARLLKRIQK 1342
            |||.|.||:||..|.||:|:||.:. :||||:.:|..||:::||||.:.|:|..||:||:|:|.|
  Rat  1343 KPPPALECRRCHIKCHKDHMDKKEEIIAPCKVYYDISSAKNLLLLANSTEEQQKWVSRLVKKIPK 1407

  Fly  1343 SGYKAASYNNNSTDGS-KISPSQSTRSSYKPYAVNVQR 1379
            .......:..:|...| ||..:||.|...:..|.|..|
  Rat  1408 KPPAPDPFARSSPRTSMKIQQNQSIRRPSRQLAPNKPR 1445

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RokNP_536796.2 STKc_ROCK 61..411 CDD:270747 244/349 (70%)
S_TKc 87..349 CDD:214567 194/261 (74%)
SbcC 484..1088 CDD:223496 215/652 (33%)
Rho_Binding 963..1027 CDD:286056 27/69 (39%)
PH_ROCK 1134..1250 CDD:269948 55/115 (48%)
C1 1254..1307 CDD:197519 32/53 (60%)
Rock2XP_008762796.1 STKc_ROCK2 39..417 CDD:270771 257/377 (68%)
S_TKc 92..354 CDD:214567 194/261 (74%)
Smc <437..1101 CDD:224117 225/684 (33%)
HR1_ROCK2 505..571 CDD:212028 19/68 (28%)
Rho_Binding 979..1046 CDD:286056 27/75 (36%)
PH_ROCK 1208..1314 CDD:269948 55/115 (48%)
C1 1318..1364 CDD:237996 29/45 (64%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166336832
Domainoid 1 1.000 412 1.000 Domainoid score I658
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H21010
Inparanoid 1 1.050 1074 1.000 Inparanoid score I232
OMA 1 1.010 - - QHG46537
OrthoDB 1 1.010 - - D36370at33208
OrthoFinder 1 1.000 - - FOG0001986
OrthoInspector 1 1.000 - - otm46140
orthoMCL 1 0.900 - - OOG6_104177
Panther 1 1.100 - - O PTHR22988
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X1475
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1413.910

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