DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Rok and Cdc42bpa

DIOPT Version :9

Sequence 1:NP_536796.2 Gene:Rok / 43916 FlyBaseID:FBgn0026181 Length:1390 Species:Drosophila melanogaster
Sequence 2:XP_017175608.1 Gene:Cdc42bpa / 226751 MGIID:2441841 Length:1810 Species:Mus musculus


Alignment Length:1319 Identity:391/1319 - (29%)
Similarity:637/1319 - (48%) Gaps:216/1319 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 RANTLEREMRDPTSICNVDC-----LLDTVSALVSDCDHESLRRLKNIEQYAAKYKPLAMQINQL 80
            |...||:.:.|..:..|..|     |||.:..|..:|::..|||.|||.:|....||...::.|:
Mouse     6 RLRQLEQFILDGPAQTNGQCFSVETLLDILICLYDECNNSPLRREKNILEYLEWAKPFTSKVKQM 70

  Fly    81 RMNVEDFHFIKLIGAGAFGEVQLVRHKSSSQVYAMKRLSKFEMMKRPDSAFFWEERHIMAHANSE 145
            |::.|||..:|:||.||||||.:|:.|::.:|:|||.|:|:||:||.::|.|.|||.::.:.:|:
Mouse    71 RLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSK 135

  Fly   146 WIVQLHFAFQDAKYLYMVMDFMPGGDIVSLMGDYD--IPEKWAIFYTMEVVLALDTIHNMGFVHR 208
            ||..||:||||...||:|||:..|||:::|:..::  :||:.|.||..|:|:|:|::|.:.:|||
Mouse   136 WITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQLHYVHR 200

  Fly   209 DVKPDNMLLDSYGHLKLADFGTCMRMGANGQVVSSNAVGTPDYISPEVLQS-QGVDNEYGRECDW 272
            |:||||:|:|..||::|||||:|:::..:|.|.||.|||||||||||:||: :.....||.||||
Mouse   201 DIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEDGKGRYGPECDW 265

  Fly   273 WSVGIFLYEMLFGETPFYADSLVGTYGKIMDHKNSLSFPPEV-EISEQAKALIRAFLTDRTQRLG 336
            ||:|:.:||||:|||||||:|||.||||||:||....||.:| ::||.||.|||..:..|..|||
Mouse   266 WSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQFPAQVTDVSENAKDLIRRLICSREHRLG 330

  Fly   337 RYGIEDIKAHPFFRNDTWSFDNIRESVPPVVPELSSDDDTRNFEDIERD-EKPEEVFPVP--KGF 398
            :.||||.|.||||....|  ||||....|.:||:||..||.|| |::.| .|..|..|.|  ..|
Mouse   331 QNGIEDFKKHPFFSGIDW--DNIRNCEAPYIPEVSSPTDTSNF-DVDDDCLKNSETMPPPTHTAF 392

  Fly   399 DGNHLPFIGFTYTGDYQLLSSD------TVDAESKEANVANSGAASNNHGHGHNHRHRPSNSNEL 457
            .|:||||:|||||....|  ||      |....|.:.:|:......||..       ..:....:
Mouse   393 SGHHLPFVGFTYTSSCVL--SDRSCLRVTAGPTSLDLDVSVQRTLDNNLA-------TEAYERRI 448

  Fly   458 KRLE-ALLERERGRSEALEQQDA-------------------GLRQQIELITKREAELQRIASEY 502
            |||| ..||..|...|:.:...|                   .|:::||.:.|:.||:..:..:.
Mouse   449 KRLEQEKLELTRKLQESTQTVQALQYSTVDGPLTASKDLEIKSLKEEIEKLRKQVAEVNHLEQQL 513

  Fly   503 EK--------DLALRQHNYKVAMQKVEQEIELRKKTEALLVETQRNLENEQKTRARDLNINDKVV 559
            |:        |.|.||  .|.:.::::...:.|::....||:....|:|:.| ..:|.:...|:.
Mouse   514 EEANSVRRELDDAFRQ--IKASEKQIKTLQQEREELNKELVQASERLKNQSK-ELKDAHCQRKLA 575

  Fly   560 SLEKQLLEMEQSYKTETENTQKLKKHNAELDFTVKSQEEKVRDMVDMIDTL-------QKHKEEL 617
            .  ::.:|:.:.........|||.:|       |:.:||:|..::...::|       ::.|:||
Mouse   576 M--QEFMEINERLTELHTQKQKLARH-------VRDKEEEVDLVMQKAESLRQELRRAERAKKEL 631

  Fly   618 GQENAELQALVVQEKNLRSQLKEMHKEAENKMQTLIN---DIERTMCREQKAQEDNRALLEKI-S 678
            ......|.|...::|.||.|.:...|:.||:::.|..   .....:|..:..||     :.|: :
Mouse   632 EVHTEALIAEASKDKKLREQSEHYSKQLENELEGLKQKQISYSPGICSIEHQQE-----ITKLKT 691

  Fly   679 DLEKAHAGLDFELKAAQGRYQQEVKAHQETEKSRLVSREEANL---QEVKALQSKLNEEKSARIK 740
            ||||.....:.|:...:|.:..|:|    ..|..|...|...|   :|:..|:.||         
Mouse   692 DLEKKSIFYEEEISKREGIHASEIK----NLKKELHDSEGQQLALNKEILVLKDKL--------- 743

  Fly   741 ADQHSQEKERQLSMLSVDYRQIQLRLQKLEGECRQESEKVAALQSQLDQEHSKRNALLSELSLHS 805
                  ||.|         |:.|...::.|.|.:|:.|:...|   |.:|:.|   |.|||...:
Mouse   744 ------EKTR---------RESQSEREEFENEFKQQYEREKVL---LTEENKK---LTSELDKLT 787

  Fly   806 SEVAHLRSRENQLQ---KELSTQREAKRRFEEDLTQL---------KSTHHEALANNRELQAQLE 858
            |....|..|...|:   |:|:.::|:...:|..:|::         ...:.:|||:  ::..:||
Mouse   788 SLYESLSLRNQHLEEEVKDLADKKESVAHWEAQITEIIQWVSDEKDARGYLQALAS--KMTEELE 850

  Fly   859 AEQCFSRLYKTQANENREESAERLSKIEDLEEERVSLKHQVQVAVARADSEALARSIAEETVADL 923
            |.:..|  ..|:|.: ......|.:|::      :|.:.::|.|:   |:|..|:...:|.:..:
Mouse   851 ALRNSS--LGTRATD-MPWKMRRFAKLD------MSARLELQSAL---DAEIRAKQAIQEELNKV 903

  Fly   924 EKEKTIKELELKDFVMKHRNEINAKEAALATLKEAENELHKKLGQKAAEYEDLVQQHKKQQEELA 988
            :....:.|.:|||...|:...::..|..:...:|..:|       |..|::|      .|...||
Mouse   904 KASNILTECKLKDSEKKNLELLSEIEQLIKDTEELRSE-------KGIEHQD------SQHSFLA 955

  Fly   989 LMRSSKDEEITKLLDKCKNEVLLKQVAVNKLAEVMNRRDSDLPKQKNK--------ARSTAELRK 1045
            .:.:..|     .||:.::.  |...:.:.:..:.:|..|..|..|.:        ...|..|||
Mouse   956 FLNTPTD-----ALDQFEDS--LSSSSSSLIDFLDDRSPSCTPASKGRRIADCAPLPAHTPTLRK 1013

  Fly  1046 K---------EKEMRRLQQELSQERDKFNQLLLKHQDLQQLCAEEQQLKQKMVME-IDCKATEIE 1100
            |         .|.             |.:|..:|.......|.:...|...::.: ..|:.....
Mouse  1014 KGCPASTGFPPKR-------------KTHQFFVKSFTAPTKCHQCTSLMVGLIRQGCSCEVCGFS 1065

  Fly  1101 NLQSKLNETASLSSADNDPEDSQHSSLLSLTQDSV---FEGWLSVPNKQNRRRGHGWKRQYVIVS 1162
            ...:.:|:..::...   |.:.....|....|..|   :||.:.:|.....::  ||:|...:|.
Mouse  1066 CHITCVNKAPTVCPV---PPEQTKGPLGIDPQKGVGTAYEGHVRIPKPAGVKK--GWQRALAVVC 1125

  Fly  1163 SRKIIFYNSDIDKHNTTDAVL--ILDL-SKVYHVRSVTQGDVIRADAKEIPRIFQLLYAGEGASH 1224
            ..|:..|:....|.:...:|:  ::|: .:.:.|.||...|||.|..|:||.||::.     ||.
Mouse  1126 DFKLFLYDIAEGKASQPTSVISQVIDMRDEEFSVSSVLASDVIHASRKDIPCIFRVT-----ASQ 1185

  Fly  1225 RPDEQSQLDVSVLHGNCNE 1243
            .....::..:.:|..:.||
Mouse  1186 LSAPSNKCSILMLADSENE 1204

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RokNP_536796.2 STKc_ROCK 61..411 CDD:270747 183/356 (51%)
S_TKc 87..349 CDD:214567 142/265 (54%)
SbcC 484..1088 CDD:223496 139/654 (21%)
Rho_Binding 963..1027 CDD:286056 11/63 (17%)
PH_ROCK 1134..1250 CDD:269948 30/116 (26%)
C1 1254..1307 CDD:197519
Cdc42bpaXP_017175608.1 STKc_MRCK_alpha 4..412 CDD:270773 200/410 (49%)
SbcC <442..>941 CDD:223496 123/563 (22%)
KELK 530..608 CDD:406277 17/87 (20%)
C1_MRCKalpha 1027..1086 CDD:410414 8/61 (13%)
PH_MRCK 1088..1222 CDD:269949 32/124 (26%)
CNH 1248..1512 CDD:395630
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0612
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D759391at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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