DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Rok and mrck-1

DIOPT Version :9

Sequence 1:NP_536796.2 Gene:Rok / 43916 FlyBaseID:FBgn0026181 Length:1390 Species:Drosophila melanogaster
Sequence 2:NP_504599.2 Gene:mrck-1 / 179013 WormBaseID:WBGene00006437 Length:1592 Species:Caenorhabditis elegans


Alignment Length:1295 Identity:363/1295 - (28%)
Similarity:611/1295 - (47%) Gaps:295/1295 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 RANTLEREMRDPTS----ICNVDCLLDTVSALVSDCDHESLRRLKNIEQYAAKYKPLAMQINQLR 81
            |..|||....|..|    ..:.:.|:|::..|..:|.:.:||:.|.|.::....|.:..:..:||
 Worm    13 RLKTLENIYMDGPSKKPEALSFETLIDSLICLYDECCNSTLRKEKCIAEFVESVKTVISKAKKLR 77

  Fly    82 MNVEDFHFIKLIGAGAFGEVQLVRHKSSSQVYAMKRLSKFEMMKRPDSAFFWEERHIMAHANSEW 146
            ::.:||..:|:||.||||||.:||.:...::||||.|:|:||:||.::|.|.|||.::.:.:..|
 Worm    78 LSRDDFEVLKVIGKGAFGEVAVVRMRGVGEIYAMKILNKWEMVKRAETACFREERDVLVYGDRRW 142

  Fly   147 IVQLHFAFQDAKYLYMVMDFMPGGDIVSLMGDY--DIPEKWAIFYTMEVVLALDTIHNMGFVHRD 209
            |..||:||||.|.||.|||:..|||:::|:..:  .|||..|.||..|:|||:|::|.:|:||||
 Worm   143 ITNLHYAFQDEKNLYFVMDYYIGGDMLTLLSKFVDHIPESMAKFYIAEMVLAIDSLHRLGYVHRD 207

  Fly   210 VKPDNMLLDSYGHLKLADFGTCMRMGANGQVVSSNAVGTPDYISPEVLQS-QGVDNEYGRECDWW 273
            |||||:|||..||::|||||:|:|:.|:|.|.|:.|||||||||||:|:: :.....||:|||||
 Worm   208 VKPDNVLLDMQGHIRLADFGSCLRILADGSVASNVAVGTPDYISPEILRAMEDGRGRYGKECDWW 272

  Fly   274 SVGIFLYEMLFGETPFYADSLVGTYGKIMDHKNSLSFP-PEVE--ISEQAKALIRAFLTDRTQRL 335
            |:||.:||||:|.||||::.||.||||||.|::.|.|| .|::  :||:||.|||..:.....|.
 Worm   273 SLGICMYEMLYGTTPFYSERLVDTYGKIMSHQDMLDFPDDEIDWVVSEEAKDLIRQLICSSDVRF 337

  Fly   336 GRYGIEDIKAHPFFRNDTWSFDNIRESVPPVVPELSSDDDTRNFE-DI-ERDEKP--EEVFP--V 394
            ||.|:.|.:.||||....|  :.||:|.||.|||:||.:||.||: |: |.|..|  :|..|  |
 Worm   338 GRNGLSDFQLHPFFEGIDW--NTIRDSNPPYVPEVSSPEDTSNFDVDVCEDDFTPCLQETQPPRV 400

  Fly   395 PKGFDGNHLPFIGFTYTGDYQLLSSDTVDAESKEANVANSGAASNNHGHGHNHRHRPSNSNELKR 459
            ...|.||||||:||:||                               ||.......|.::|:: 
 Worm   401 LAAFTGNHLPFVGFSYT-------------------------------HGSLLSDARSLTDEIR- 433

  Fly   460 LEALLERERGRSEALEQQDAGL-----RQQIELITKREAELQRIASEY--EKDLALRQHNYKVAM 517
              |:.:|.:|.:|.:|:...|.     .::.||:.|.: |.|.|.:::  |...:....||:..:
 Worm   434 --AIAQRCQGDAELMEKSVDGFMVELENEKAELVQKLK-EAQTIIAQHVAENPRSEEDRNYESTI 495

  Fly   518 QKVEQEIELRKKTEALLVETQRNLENEQKTRARDLNINDKVVSLEKQLLEMEQSYKTETENTQKL 582
            .:::.||::..|.    :|.:...:.:||.:       |::|:      |.|:..|...|..::|
 Worm   496 AQLKDEIQILNKR----LEDEALAQQQQKPK-------DEIVA------ESEKKLKELKERNKQL 543

  Fly   583 KKHNAELDFTVKSQEEKVRDMVDMI----DTLQKHKEELGQENAELQALVVQEKNLRSQLKEMHK 643
            ....:|    ::.:.:.:.|.:|.:    .|:.:.::::..|.|::...::.||:   .:|.:..
 Worm   544 VMEKSE----IQRELDNINDHLDQVLVEKATVVQQRDDMQAELADVGDSLLTEKD---SVKRLQD 601

  Fly   644 EAENKMQTLINDIERTMCREQKAQEDNRALLEKISDLE-KAHAGLDFELKAAQGRYQQEVKAHQE 707
            ||| |.:..:.|.|..:   ::.:.:..||::|..::. :|...::     ......:||.|.:.
 Worm   602 EAE-KAKKQVADFEEKL---KEIETEKIALIKKQEEVTIEARKSVE-----TDDHLSEEVVAAKN 657

  Fly   708 TEKSRLVSREEANLQEVKALQSKLNEEKSARIKADQHSQEKERQLSMLSVDYRQIQLRLQKLEGE 772
            |..|...:.||.. .|:|.|:.:::||:::      |:.:.|:::..|...|.    |.||:   
 Worm   658 TIASLQATNEERE-TEIKKLKQRMDEERAS------HTAQSEQEMKQLEAHYE----RAQKM--- 708

  Fly   773 CRQESEKVAALQSQLDQEHSKRNALLSELSLHSSEVAHLRS---RENQLQKELS--TQREAKRRF 832
                      ||..::|.:.:...|..|:...|.::|.|..   .|.||.:..:  ::.:|.|..
 Worm   709 ----------LQDNVEQMNVENRGLRDEIEKLSQQMAALPRGGLNEQQLHEIFNWVSEEKATREE 763

  Fly   833 EEDLTQLKSTHHEALANNR-----------------------------ELQAQLEAEQCFSRLYK 868
            .|:||:..:...|:|.||.                             :||.||:||.......|
 Worm   764 MENLTRKITGEVESLKNNSPLTTSNYIQNTPSGWGSRRMNNVARKDGLDLQRQLQAEIDAKLKLK 828

  Fly   869 TQANENREESAERLSKIEDLEEERVSLKHQVQVAVARADSEALARSIAEETVADLEKEKTIKELE 933
            .:...::|:.....::::|.|:...||..:                     ||.|:::|.|:   
 Worm   829 AELKNSQEQYLTSAARLDDTEKRMASLMRE---------------------VAMLKQQKNIE--- 869

  Fly   934 LKDFVMKHRNEINAKEAALATLKEAENELHKKLGQKAAEYEDLVQQHKKQQEELALMRSSKDEEI 998
                        |:.::|.::.. ...:|...:..   :||  :......::|:...:|:...| 
 Worm   870 ------------NSSDSAFSSTM-GRGDLMISMNN---DYE--MSNSSLMRQEMISRQSTPSYE- 915

  Fly   999 TKLLDKCKNEVLLKQVAVNKLAEVMNRRDSDLPKQKNKARSTAELRKKEKEMRRLQQELS----- 1058
                    |.:||              .|..:||:.:      :||.|:|.|:......|     
 Worm   916 --------NAILL--------------HDHQVPKRVD------DLRYKQKPMKTASGIFSPVSIS 952

  Fly  1059 -QER-DKFNQLLLKHQ-------------DLQQL------------CAEEQQLKQKMVMEIDCKA 1096
             .|| ..|.::.:|..             |.|.|            |||.        :...|..
 Worm   953 AMERGHNFERMKIKTPTKCGHCTSILIGLDRQGLFCQSCQYACHVSCAER--------VSQSCPV 1009

  Fly  1097 TEIENLQSKLNETASLSSADNDPEDSQHSSLLSLTQDSVFEGWLSVPNKQNRRRGHGWKRQYVIV 1161
            .|.|.....::.|..:.:|                    :||.:..|.....|:  ||:..||:|
 Worm  1010 PEEERRPLGIDPTRGVGTA--------------------YEGLVKTPRAGGVRK--GWQTAYVVV 1052

  Fly  1162 SSRKIIFYNSDIDKHNTTDAV-----LILDL-SKVYHVRSVTQGDVIRADAKEIPRIFQL 1215
            ...|:..|:..:|:.|....|     |:||: ...:.|..|::.|||.|...:||:||::
 Worm  1053 CDFKLYLYDCTVDRQNKMQDVKNEIRLVLDMRDPDFTVCGVSEADVIHAQKGDIPKIFRV 1112

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RokNP_536796.2 STKc_ROCK 61..411 CDD:270747 180/361 (50%)
S_TKc 87..349 CDD:214567 141/267 (53%)
SbcC 484..1088 CDD:223496 127/676 (19%)
Rho_Binding 963..1027 CDD:286056 8/63 (13%)
PH_ROCK 1134..1250 CDD:269948 27/88 (31%)
C1 1254..1307 CDD:197519
mrck-1NP_504599.2 STKc_DMPK_like 81..417 CDD:270748 175/337 (52%)
S_TKc 83..351 CDD:214567 141/267 (53%)
COG1340 494..786 CDD:224259 71/348 (20%)
C1 958..1007 CDD:237996 8/56 (14%)
PH_MRCK 1016..1159 CDD:269949 29/119 (24%)
CNH 1182..1494 CDD:214481
PBD 1544..1582 CDD:197628
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0612
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D759391at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

Return to query results.
Submit another query.