DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Rok and let-502

DIOPT Version :9

Sequence 1:NP_536796.2 Gene:Rok / 43916 FlyBaseID:FBgn0026181 Length:1390 Species:Drosophila melanogaster
Sequence 2:NP_491440.1 Gene:let-502 / 172088 WormBaseID:WBGene00002694 Length:1173 Species:Caenorhabditis elegans


Alignment Length:1380 Identity:445/1380 - (32%)
Similarity:693/1380 - (50%) Gaps:250/1380 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 LEREMRDPTSICNVDCLLDTVSALVSDCDHESLRRLKNIEQYAAKYKPLAMQINQLRMNVEDFHF 89
            |..::.||.|..|::.||||::|||:||....|.|:|:::.:.::|:.:...:..|||...||..
 Worm     6 LRDQLVDPKSPINIESLLDTITALVNDCKIPVLMRMKSVDNFISRYERVVESLAALRMKAADFRQ 70

  Fly    90 IKLIGAGAFGEVQLVRHKSSSQVYAMKRLSKFEMMKRPDSAFFWEERHIMAHANSEWIVQLHFAF 154
            :|:||.||||||.||||..::.|||||.|:|.:|:||.|||||||||.|||||||||||:|.:||
 Worm    71 LKVIGRGAFGEVHLVRHTRTNTVYAMKMLNKDDMIKRADSAFFWEERDIMAHANSEWIVRLQYAF 135

  Fly   155 QDAKYLYMVMDFMPGGDIVSLMGDYDIPEKWAIFYTMEVVLALDTIHNMGFVHRDVKPDNMLLDS 219
            ||.::|||||::|||||:|:||..|::.|||..|||.|:|.||..:|:||::||||||||||:..
 Worm   136 QDPRHLYMVMEYMPGGDLVNLMTSYEVSEKWTRFYTAEIVEALAALHSMGYIHRDVKPDNMLISI 200

  Fly   220 YGHLKLADFGTCMRMGANGQVVSSNAVGTPDYISPEVLQSQGVDNEYGRECDWWSVGIFLYEMLF 284
            .||:||||||||::|.|||.|..|.|||||||||||||::||.|.|:|:|.||||||:|:||||.
 Worm   201 SGHIKLADFGTCVKMNANGVVRCSTAVGTPDYISPEVLRNQGQDAEFGKEVDWWSVGVFIYEMLV 265

  Fly   285 GETPFYADSLVGTYGKIMDHKNSLSFPPEVEISEQAKALIRAFLTDRTQRLGRYGIEDIKAHPFF 349
            |||||||::||.||..||:||.||.||.|..||.|||.:|:.||:....||||..::||:.|.||
 Worm   266 GETPFYAEALVSTYTNIMNHKTSLKFPDEPLISTQAKDIIKKFLSAAPDRLGRNSVDDIRNHKFF 330

  Fly   350 RNDTWSFDNIRESVPPVVPELSSDDDTRNFEDIE-RDEKPEEVFPVPKGFDGNHLPFIGFTYTGD 413
            .||.|:|..:||:.|||:|.|.|||||.:||:|| ||......|.:||.|:||.||||||||:.:
 Worm   331 VNDEWTFATLREASPPVIPSLKSDDDTTHFEEIETRDRDNAGDFQLPKTFNGNQLPFIGFTYSNE 395

  Fly   414 YQLLSSDTVDAESKEANVANS-GAASNNHGHGHNHRHRPSNSNELKRLEALLERERGRSEALEQQ 477
            |           |...|:... ||.|..:|   ..:|:|         :.::|:......|    
 Worm   396 Y-----------SPVKNLLKGHGAGSKQNG---IEQHKP---------QTVVEQPLTNGHA---- 433

  Fly   478 DAGLRQQIELITKREAELQRIASEYEKDLALRQHNYKVAMQKVEQEIELRKKTEALLVETQRNLE 542
             :|:.::.....|.|.:.:....|..||...|.              |:|.|    ::|.::|  
 Worm   434 -SGVPEEKYEAVKMELDSKNREFELLKDSIARN--------------EIRAK----MIENEKN-- 477

  Fly   543 NEQKTRARDLNINDKVVSLEKQLLEMEQSYKTETENTQKL----------KKHNAELDFTVKSQE 597
                      :::.|:..||::|.:.:...:...::..|:          |::|:|::    |:.
 Worm   478 ----------SLSTKISDLERELKDNKDKLRHGADSDAKVNELAVELRMSKEYNSEME----SEL 528

  Fly   598 EKVRDMVDMIDTLQKHKEELGQENAELQALVVQEKNLRSQLKEMHKEAENKMQTLINDIERTMCR 662
            .|.||..:.:      ||:|.:::.||    .||||...::.:..|:|:.....:..|.|....|
 Worm   529 SKFRDKCEQL------KEDLRKKSGEL----AQEKNETQRVFQQKKDADEAFAEIKRDYELLQTR 583

  Fly   663 EQKAQEDNRALLEKISDLEKAHAGLDFELKAAQGRYQQEVKAHQETEKSRLVSREEANLQEVKAL 727
            |.          ||...|:||     .:.:...|.|||.|....:.|..|.:...|..|:..   
 Worm   584 EN----------EKSVQLKKA-----LDERKENGAYQQSVAKATDAEWERKMQFYEKQLEHA--- 630

  Fly   728 QSKLNEEKSARIKADQHSQEKERQLSMLSVDYRQIQLRLQKLEGECRQESEKVAALQSQLDQEHS 792
                |:|:.                                     |:|.::.||   :.||...
 Worm   631 ----NDERK-------------------------------------REEQKRTAA---EFDQSRV 651

  Fly   793 KRNALLSELSLHSSEVAHLRSRENQLQKELSTQREAKRRFEEDLTQLKSTHHEALANNRELQAQL 857
            .|            ::|.:.:....||.:..:.:||::..|.||       .:.:...|.|:.::
 Worm   652 AR------------KLAGIEANYELLQNDYKSMKEARKDLERDL-------QDVITEKRRLEIRV 697

  Fly   858 E----AEQCFSRLYKTQANENREESAERLSKIEDLEEERVSLKHQVQVAVARADSEALARSIAEE 918
            |    :.....|:.....:|..|...|...|.:.|..:....||::       ::|.:.....||
 Worm   698 EQLMDSRNTDERVLSLCQDELVESQEEAKYKEDGLRGKIDGFKHEL-------ENEKMKTQTLEE 755

  Fly   919 TVADLEKEKTIKELELKDFVMKHRNEINAKEAALATLKEAENELHKKLGQKAAEYEDLVQQHKKQ 983
            .:...:||:.:.::|:::.:.:|:.||..|:   .|||..|.:|           :::.||.|.:
 Worm   756 NLLVADKERGMLKMEVQELMQRHKWEITNKD---QTLKHLETQL-----------DEIKQQSKIE 806

  Fly   984 QEELALMRSSKDEEITKLLDKCKNEVLLKQVAVNKLAEVMNRRDSDLP-KQKNKARSTAELRKKE 1047
            ..|   ..|:..:.|..|..|...|...|:..:|||.|.|.:|.   | |:..|..:.:.|.|||
 Worm   807 SSE---QESNDKQTIADLRKKLDLEKAHKKAVINKLEEEMAKRQ---PLKKGEKGVTKSALIKKE 865

  Fly  1048 KEMRRLQQE----------LSQERDK----FNQLLLKHQDLQQLCAEEQQLKQKMVMEIDCKATE 1098
            :|:..|:||          |..|.||    ||..:...|..|....:|  ||       :|| .|
 Worm   866 REIMALEQERDTMSKRIAALFYENDKQAEHFNIAIQDMQTTQDALRDE--LK-------ECK-EE 920

  Fly  1099 I--ENLQSKLNETASLSSADNDPE--DSQHSSLLSLTQDSVFEGWLSVPNKQNRRRGHGWKRQYV 1159
            :  .|:.::..:..||.|.:..|.  .:||..:         |||||:.:...:.|...|...:|
 Worm   921 LANRNVNTRYEDKRSLDSREGIPSSLSNQHIQM---------EGWLSLRDNTKKSRKPKWTNCFV 976

  Fly  1160 IVSSRKIIFYNSDIDKHNTTDAVLILDLSKVYHVRSVTQGDVIRADAKEIPRIFQLLYAGEGASH 1224
            .::......|   :|: .....:|:::...:.|||.||..|:...|..::|:||.::| .:.:.:
 Worm   977 ALNEYSFTIY---VDE-KAVSVILLIEAGAMAHVRHVTAADLRNVDDSQLPKIFHIMY-DDASCN 1036

  Fly  1225 RPDEQSQLDVSVLHGNCNEERPGTIVHKGHEFVHITYHMPTACEVCPKPLWHMFKPPAAYECKRC 1289
            .....|..|:|::.....|.      .|.|:|..::||:.|.|:||.|.|..:.:|..|:|||.|
 Worm  1037 SSRHASNSDLSMIESFREES------WKRHDFQELSYHIRTFCDVCNKKLSDIIRPTPAFECKNC 1095

  Fly  1290 RNKIHKEHVDKHDPLAPCKLNHDPRSARDMLLLAATPEDQSLWVARLLKRIQKSGYKAASYNNNS 1354
            ..|.||:|| ....|..|:.|  ...:|:::|:|...::.:.||::|.:.|:.|  ::|:.:.:.
 Worm  1096 HFKTHKDHV-AQGSLPMCRYN--TGLSRELVLMAPQTDNCNKWVSQLRRFIESS--RSAAVSVSR 1155

  Fly  1355 TDGSKISPSQSTRSS 1369
            ....:.:|..|..|:
 Worm  1156 VSSRRHAPGSSNSST 1170

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RokNP_536796.2 STKc_ROCK 61..411 CDD:270747 210/350 (60%)
S_TKc 87..349 CDD:214567 167/261 (64%)
SbcC 484..1088 CDD:223496 133/632 (21%)
Rho_Binding 963..1027 CDD:286056 15/63 (24%)
PH_ROCK 1134..1250 CDD:269948 26/115 (23%)
C1 1254..1307 CDD:197519 22/52 (42%)
let-502NP_491440.1 PKc_like 41..393 CDD:304357 210/351 (60%)
S_TKc 68..330 CDD:214567 167/261 (64%)
PH-like 951..1056 CDD:302622 25/118 (21%)
C1 1060..1112 CDD:197519 22/52 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160157476
Domainoid 1 1.000 361 1.000 Domainoid score I501
eggNOG 1 0.900 - - E2759_KOG0612
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H21010
Inparanoid 1 1.050 630 1.000 Inparanoid score I462
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG46537
OrthoDB 1 1.010 - - D36370at33208
OrthoFinder 1 1.000 - - FOG0001986
OrthoInspector 1 1.000 - - oto20713
orthoMCL 1 0.900 - - OOG6_104177
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2768
SonicParanoid 1 1.000 - - X1475
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1514.700

Return to query results.
Submit another query.