DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rok and Cdc42bpb

DIOPT Version :9

Sequence 1:NP_536796.2 Gene:Rok / 43916 FlyBaseID:FBgn0026181 Length:1390 Species:Drosophila melanogaster
Sequence 2:XP_006240624.1 Gene:Cdc42bpb / 113960 RGDID:621753 Length:1730 Species:Rattus norvegicus


Alignment Length:1356 Identity:385/1356 - (28%)
Similarity:660/1356 - (48%) Gaps:245/1356 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 LEREMRDPTSICNVDCLLDTVSALVSDCDHESLRRLKNIEQYAAKYKPLAMQINQLRMNVEDFHF 89
            |:...|:.:|: :|:.|||.:..|.::|.|.:|||.|.:.::....||....:..::::.|||..
  Rat    15 LDGPWRNESSL-SVETLLDVLVCLYTECSHSALRRDKYVAEFLEWAKPFTQLVKDMQLHREDFEI 78

  Fly    90 IKLIGAGAFGEVQLVRHKSSSQVYAMKRLSKFEMMKRPDSAFFWEERHIMAHANSEWIVQLHFAF 154
            ||:||.||||||.:|:.|::.::||||.|:|:||:||.::|.|.|||.::.:.:.:||..||:||
  Rat    79 IKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVNGDCQWITALHYAF 143

  Fly   155 QDAKYLYMVMDFMPGGDIVSLMGDYD--IPEKWAIFYTMEVVLALDTIHNMGFVHRDVKPDNMLL 217
            ||..|||:|||:..|||:::|:..::  :||..|.||..|:|||:|:||.:.:||||:||||:||
  Rat   144 QDENYLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSIHQLHYVHRDIKPDNVLL 208

  Fly   218 DSYGHLKLADFGTCMRMGANGQVVSSNAVGTPDYISPEVLQS--QGVDNEYGRECDWWSVGIFLY 280
            |..||::|||||:|::|..:|.|.||.|||||||||||:||:  .|: .:||.||||||:|:.:|
  Rat   209 DVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQAMEDGM-GKYGPECDWWSLGVCMY 272

  Fly   281 EMLFGETPFYADSLVGTYGKIMDHKNSLSFPPEV-EISEQAKALIRAFLTDRTQRLGRYGIEDIK 344
            |||:|||||||:|||.||||||:|:....||..| ::||:||.||:..:..|.:|||:.||||.|
  Rat   273 EMLYGETPFYAESLVETYGKIMNHEERFQFPSHVTDVSEEAKDLIQRLICSRERRLGQNGIEDFK 337

  Fly   345 AHPFFRNDTWSFDNIRESVPPVVPELSSDDDTRNFEDIERDE-KPEEVFPVPK--GFDGNHLPFI 406
            .|.||....|  :|||....|.:|::||..||.|| |::.|. :..|:.|...  ||.|.|||||
  Rat   338 KHAFFEGLNW--ENIRNLEAPYIPDVSSPSDTSNF-DVDDDVLRNIEILPPGSHTGFSGLHLPFI 399

  Fly   407 GFTYTGD---------YQLLSSDTVDAESKEANVANSGAASNNHGHGHNHRHRPSNSNELKRLEA 462
            |||:|.:         ..::.|:|:   :|:.:|                :....||.:::..|.
  Rat   400 GFTFTTESCFSDRGSLKSMIQSNTL---TKDEDV----------------QRDLENSLQIEAYER 445

  Fly   463 LLERERGRSEALEQQDAGLRQQIELITKREAELQRIASEYEKDLALRQHNYKVAMQKVEQEIELR 527
            .:.|       |||      :::||..|.:...|.:.|.:....||...|....::::.:|:|..
  Rat   446 RIRR-------LEQ------EKLELSRKLQESTQTVQSLHGSTRALGNSNRDKEIKRLNEELERM 497

  Fly   528 KKTEALLVETQRNLENEQKTRARDLNINDKVVSLEKQLLEMEQSYKTETENTQKLKKHNAELDFT 592
            |...|.....:|.||:....|....:...::..||||       |:...:..::|.|...|....
  Rat   498 KSKMADSNRLERQLEDTVTLRQEHEDSTQRLKGLEKQ-------YRLARQEKEELHKQLVEASER 555

  Fly   593 VKSQEEKVRDMVDMIDTLQKHKEELGQENAELQALVVQEKNLRSQLKEMHKEAENKMQTLINDIE 657
            :|||.::::|.........:...||.:..|||::   |::.:..||::..:|.|..||. |:.:.
  Rat   556 LKSQTKELKDAHQQRKRALQEFSELNERMAELRS---QKQKVSRQLRDKEEEMEVAMQK-IDSMR 616

  Fly   658 RTMCREQKAQEDNRALLE-KISDLEK-----AHA-----GLDFE---LKAAQG--------RYQQ 700
            :.:.:.:|::::..|.|| .:::..|     .|:     .::.|   ||..||        .:||
  Rat   617 QDIRKSEKSRKELEARLEDAVAEASKERKLREHSESFSKQMERELETLKVKQGGRGPGATLEHQQ 681

  Fly   701 EV-KAHQETEK------SRLVSREEANLQEVKALQSKLNEEKSARI----------------KAD 742
            |: |...|.||      ..||.||.:::.|||.::.:::|.:|.::                |.:
  Rat   682 EISKIRSELEKKVLFYEEELVRREASHVLEVKNVKKEVHESESHQLALQKEVLMLKDKLEKSKRE 746

  Fly   743 QHSQEKERQLSMLSVDYRQIQLRLQKLEGECRQESEKVAALQSQLDQEHSKRNALLSELSLHSSE 807
            :|| |.|..:..:...|.:.:..|.....:...|:||:.:...:|..::.:....|.:|:.....
  Rat   747 RHS-EMEEAIGAMKDKYERERAMLFDENKKLTAENEKLCSFVDKLTAQNRQLEDELQDLASKKES 810

  Fly   808 VAHLRSRENQLQKELSTQREAK-------RRFEEDLTQLKSTHHEALANNRELQAQLEAEQCFSR 865
            |||..::..::.:.:|.:::|:       .:..|:|..|:|:.    ..:|.|..          
  Rat   811 VAHWEAQIAEIIQWVSDEKDARGYLQALASKMTEELETLRSSS----LGSRTLDP---------- 861

  Fly   866 LYKTQANENREESAERLSKIEDLEEERVSLKHQVQVAVARADSEALARSIAEETVADLEKEKTIK 930
            |:|.:.::..:.|| ||               ::|.|:   ::|..|:.:..|.:..::......
  Rat   862 LWKVRRSQKLDMSA-RL---------------ELQSAL---EAEIRAKQLVHEELRKVKDTSLAF 907

  Fly   931 ELELKDFVMKHRNEINAKEAALATLKEAENELHKKLGQKAAEYEDLVQQH---KKQQEELALMRS 992
            |.:||:...|:|..:   |...:..|..|.:.....|.|..:::|.:.::   .....:|....|
  Rat   908 ESKLKESEAKNRELL---EEMQSLKKRMEEKFRADTGLKLPDFQDPIFEYFNTAPLAHDLTFRDS 969

  Fly   993 SKDEEITKLLD--KCKNEVLLKQVAVNKLAEVMNRRDSDLPKQKNKARSTAELRKKEKEMRRLQQ 1055
            ......:.||.  :..:....::...:||         ||....:.|.||    :::::..|.||
  Rat   970 LSSSSASSLLALWEDTSSASDQETQASKL---------DLSPSVSVATST----EQQEDAARSQQ 1021

  Fly  1056 E-------------LSQERDKFNQLLLKHQDLQQLCAEEQQLKQKMVME------------IDCK 1095
            .             ::..:.|.:|..:|.......|:....|...::.:            :.||
  Rat  1022 RPSTVPLPNTQALAMAGPKPKAHQFSIKSFPSPTQCSHCTSLMVGLIRQGYACEVCAFSCHVSCK 1086

  Fly  1096 ATEIENLQSKLNETASLSSADN----DPEDSQHSSLLSLTQ--DSVFEGWLSVPNKQNRRRGHGW 1154
                             .||..    .||.|:....:.:.:  .:.::|::.||.....::  ||
  Rat  1087 -----------------DSAPQVCPIPPEQSKRPLGVDVQRGIGTAYKGYVKVPKPTGVKK--GW 1132

  Fly  1155 KRQYVIVSSRKIIFYNSDIDKHNTTD----AVLILDL-SKVYHVRSVTQGDVIRADAKEIPRIFQ 1214
            :|.|.:|...|:..|  |:.:..:|.    |..:||| ...:.|.||...|||.|..::||.||:
  Rat  1133 QRAYAVVCDCKLFLY--DLPEGKSTQPGVIASQVLDLRDDEFAVSSVLASDVIHATRRDIPCIFR 1195

  Fly  1215 LLYAGEGASHRPDEQSQLDVSVLHGNCNEERP--------GTIVHKGH---EFVHI 1259
            :..:..|:   |.:.|.|  .:|..|.||:|.        ..|:||..   :.||:
  Rat  1196 VTASLLGS---PSKTSSL--LILTENENEKRKWVGILEGLQAILHKNRLRSQVVHV 1246

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RokNP_536796.2 STKc_ROCK 61..411 CDD:270747 179/357 (50%)
S_TKc 87..349 CDD:214567 145/266 (55%)
SbcC 484..1088 CDD:223496 133/673 (20%)
Rho_Binding 963..1027 CDD:286056 9/68 (13%)
PH_ROCK 1134..1250 CDD:269948 36/128 (28%)
C1 1254..1307 CDD:197519 2/9 (22%)
Cdc42bpbXP_006240624.1 STKc_MRCK_beta 3..411 CDD:270774 193/400 (48%)
S_TKc 76..342 CDD:214567 145/266 (55%)
TPH 419..786 CDD:290579 89/410 (22%)
KELK 528..606 CDD:292424 21/87 (24%)
DMPK_coil 878..939 CDD:117396 13/66 (20%)
C1 1044..1093 CDD:237996 8/65 (12%)
PH_MRCK 1103..1237 CDD:269949 38/142 (27%)
CNH 1263..1529 CDD:279162
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0612
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D759391at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.820

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