DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Rok and rock2

DIOPT Version :9

Sequence 1:NP_536796.2 Gene:Rok / 43916 FlyBaseID:FBgn0026181 Length:1390 Species:Drosophila melanogaster
Sequence 2:XP_004914525.1 Gene:rock2 / 100493965 XenbaseID:XB-GENE-959451 Length:1399 Species:Xenopus tropicalis


Alignment Length:1426 Identity:622/1426 - (43%)
Similarity:886/1426 - (62%) Gaps:107/1426 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 TKQRSMDVERRRRANTLEREMRDPTSICNVDCLLDTVSALVSDCDHESLRRLKNIEQYAAKYKPL 73
            |::..|:..|:    |||..:|||.|..||:.|||.::::|.|.|..:||:.|||:.:..:|:.:
 Frog     4 TQEECMNSRRQ----TLEAILRDPRSPINVEGLLDGLNSIVLDLDFPALRKNKNIDNFLNRYEKI 64

  Fly    74 AMQINQLRMNVEDFHFIKLIGAGAFGEVQLVRHKSSSQVYAMKRLSKFEMMKRPDSAFFWEERHI 138
            ..::.:|:|..||:..:|:||.||||||||||||.|.:|||||.||||||:||.|||||||||.|
 Frog    65 VREVRKLQMKAEDYDVVKVIGRGAFGEVQLVRHKGSQKVYAMKLLSKFEMIKRSDSAFFWEERDI 129

  Fly   139 MAHANSEWIVQLHFAFQDAKYLYMVMDFMPGGDIVSLMGDYDIPEKWAIFYTMEVVLALDTIHNM 203
            ||.|||.|:|||..||||.|:|||||::|||||:|:||.:||:|||||.|||.||||||:.||:|
 Frog   130 MAFANSPWVVQLFCAFQDEKHLYMVMEYMPGGDLVNLMSNYDVPEKWAKFYTAEVVLALNAIHSM 194

  Fly   204 GFVHRDVKPDNMLLDSYGHLKLADFGTCMRMGANGQVVSSNAVGTPDYISPEVLQSQGVDNEYGR 268
            |.:||||||||||||.|||||||||||||:|...|.|....|||||||||||||:|||.|..|||
 Frog   195 GLIHRDVKPDNMLLDKYGHLKLADFGTCMKMDQTGMVRCDTAVGTPDYISPEVLKSQGGDGYYGR 259

  Fly   269 ECDWWSVGIFLYEMLFGETPFYADSLVGTYGKIMDHKNSLSFPPEVEISEQAKALIRAFLTDRTQ 333
            ||||||||:||:|||.|:||||||||||||.|||||||||:||.:||||..||.||.||||||..
 Frog   260 ECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKIMDHKNSLNFPEDVEISVHAKNLICAFLTDREV 324

  Fly   334 RLGRYGIEDIKAHPFFRNDTWSFDNIRESVPPVVPELSSDDDTRNFEDIERDEKPEEVFPVPKGF 398
            ||||.||||||.||||:||.|::|||||:|.||||||:||.||.||:|||.|:...|.||.||.|
 Frog   325 RLGRNGIEDIKQHPFFKNDQWNWDNIRETVAPVVPELASDIDTSNFDDIEDDKGDAETFPNPKAF 389

  Fly   399 DGNHLPFIGFTYTGDYQLLSSDTVDAESKEANVANSGAASNNHGHGHNHRHRPSNSNELKRLEAL 463
            .||.||||||||..:..|||..:.:.:.|     ||.|........|..:       .:.:||..
 Frog   390 AGNQLPFIGFTYYRENLLLSESSRNCKEK-----NSSAQPMKEQSAHLQK-------VINKLEEQ 442

  Fly   464 LERERGRSEALEQQDAGLRQQIELITKREAE-------LQRIASEYEKDLALRQHNYKVAMQKVE 521
            |..|....:.|||:...:..::|...|...|       ::....:.|::.||.||......:|.|
 Frog   443 LHNEMQTKDELEQKFRAVNLRLEKTVKELDEEANARKSIESTTRQLEREKALLQHKSTEYQRKAE 507

  Fly   522 QEIELRKKTEALLVETQRNLENEQKTRARDLNINDKVVSLEKQLLEMEQSYKTETENTQKLKKHN 586
            .:.:.::..|..:...:..||:.::........|:|:..|::||.|.....:||::...:|:|..
 Frog   508 NDADRKRSLENEVNSLKDQLEDLKRRNQNSQISNEKMNQLQRQLDEANAQLRTESDAAARLRKTQ 572

  Fly   587 AELDFTVKSQEEKVRDMVDMIDTLQKHKEELGQENAELQALVVQEKNLRSQLKEMHKEAENKMQT 651
            .|:...::..|...|::.|....|:..|.:|.::...||:.:..|:..|:|..|:..:.:.::..
 Frog   573 TEMSKQIQQLETNNRELQDKTCMLENAKLKLEKDFINLQSALESERRDRTQGSEVISDLQGRISV 637

  Fly   652 LINDIERTMCREQKAQEDNRALLEKISDLEKAHAGLD----FELKAAQGRYQQEVKAHQETEKSR 712
            |..|:::......:|:.:.:.:.|.::.|||..:.|:    ::|||.|...::|...|:.| |:|
 Frog   638 LEEDLKKGKELLARAEAEKQQMHEGLAILEKEKSNLEIDMTYKLKALQQSVEKEEAEHKAT-KAR 701

  Fly   713 LVSR-------EEANLQEVKALQSKLNEEKSARIKADQHSQEKERQLSMLSVDYRQIQLRLQKLE 770
            |..:       ||...:.:|.::.||:||:..:.:.:....|.|:|.|||..|.:|.:.::.:||
 Frog   702 LADKNKIYQSIEETKSEAMKDMEKKLHEERLVKQRLENSLLETEKQYSMLDCDLKQAKQKINELE 766

  Fly   771 GECRQESEKVAALQSQLDQEHSKRNALLSELSLHSSEVAHLRSRENQLQKELSTQREAKRRFEED 835
            ....:.||.|..|..:.:||..|||...::|.:...:|..|:..|.||::|::...|.|...|:.
 Frog   767 SLKDKLSEDVKNLTLKAEQEAQKRNLTHNDLKMQIQQVNSLKMSEKQLKQEINHLTEIKLNLEKQ 831

  Fly   836 LTQLKSTHHEALANNRELQAQLEAEQCFSRLYKTQANENREESAER-------LSKIEDLEEERV 893
            ..:|:....:|....:|||.||||||.||.|||||..|.:||..::       ..|:::|::||.
 Frog   832 NNELRKERVDADGQMKELQDQLEAEQYFSTLYKTQVRELKEECEDKSKMCKEVQQKVQELQDERD 896

  Fly   894 SLKHQVQVAVARADSEALARSIAEETVADLEKEKTIKELELKDFVMKHRNEINAKEAALATLKEA 958
            ||..|:::.:.:||||.||||||||..:||||||.:||||:|:.:.:|:.|:..|.|.:|:|:||
 Frog   897 SLAAQLEITLTKADSEQLARSIAEEQYSDLEKEKIMKELEIKEMMARHKQELAEKYATIASLEEA 961

  Fly   959 ENELHKKLGQKAAEYEDLVQQHKKQQEELALMRSSKDEEITKLLDKCK------NEVLLKQVAVN 1017
            ...|...:|..|.|.|||..:.|:.||   |:::.|:||.:.:..|.:      .|..||..|||
 Frog   962 NKTLTIDVGNLANEKEDLNNKLKETQE---LIQNLKEEESSIITVKAQFEKQLLTERTLKTQAVN 1023

  Fly  1018 KLAEVMNRRDSDLPKQKNKARSTAELRKKEKEMRRLQQELSQERDKFNQLLLKHQ----DLQQLC 1078
            ||||:|||:   ||   .|.....::|:||||.|:||.:|..||:||:||:.|:|    |:|.|.
 Frog  1024 KLAEIMNRK---LP---TKRGPDTDVRRKEKENRKLQLDLKSEREKFSQLVFKYQREVNDMQALI 1082

  Fly  1079 AEEQQLKQKMVMEIDCKATEIENLQSKLN------ETASLSS--ADNDPEDSQHSSLLSLTQDSV 1135
            |:|.|.:.::.|.:|.|.::||.|:|:|.      ::.|:.|  .|.|.:|....|.|       
 Frog  1083 ADENQARVELQMALDSKDSDIEQLRSQLQSMNLGLDSTSIGSGHGDTDADDGFPESRL------- 1140

  Fly  1136 FEGWLSVPNKQNRRRGHGWKRQYVIVSSRKIIFYNSDIDKHNTTDAVLILDLSKVYHVRSVTQGD 1200
             |||||:|.:..::  .||.::||:||||||:||:|:.|| ..::..::||:.|::|||.|||.|
 Frog  1141 -EGWLSLPLRNAKK--FGWNKKYVVVSSRKILFYDSEQDK-ELSNPSMVLDIDKLFHVRPVTQTD 1201

  Fly  1201 VIRADAKEIPRIFQLLYAGEGASHRPDEQSQLDVSVLHGNCNEERPGTIVHKGHEFVHITYHMPT 1265
            |.||||||||||||:|||.||.| :.:::.|:|..        |:...|.||||||:...||.||
 Frog  1202 VYRADAKEIPRIFQILYANEGES-KKEQEFQVDPL--------EKSNYICHKGHEFIPTLYHFPT 1257

  Fly  1266 ACEVCPKPLWHMFKPPAAYECKRCRNKIHKEHVDKHDP-LAPCKLNHDPRSARDMLLLAATPEDQ 1329
            :|:.|.||||||||||||.||:||..|.||:|:||.:. :||||:|:|..:|:::||||.:.|:|
 Frog  1258 SCDACMKPLWHMFKPPAALECRRCHIKCHKDHMDKKEEIIAPCKVNYDISTAKNLLLLANSTEEQ 1322

  Fly  1330 SLWVARLLKRIQK----SGYKAASYNNNSTDGSKISPSQSTRSSYKPYAVNVQRSATLPAN 1386
            ..||:||:|:|.|    |.::|.|   :....:|.|.:||.|   :|       |..||.|
 Frog  1323 QKWVSRLVKKIPKKPPASDHQARS---SPRPPAKASLNQSMR---RP-------SRQLPPN 1370

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RokNP_536796.2 STKc_ROCK 61..411 CDD:270747 247/349 (71%)
S_TKc 87..349 CDD:214567 197/261 (75%)
SbcC 484..1088 CDD:223496 203/638 (32%)
Rho_Binding 963..1027 CDD:286056 27/69 (39%)
PH_ROCK 1134..1250 CDD:269948 53/115 (46%)
C1 1254..1307 CDD:197519 32/53 (60%)
rock2XP_004914525.1 STKc_ROCK2 25..403 CDD:270771 259/377 (69%)
S_TKc 78..340 CDD:214567 197/261 (75%)
Smc <432..1113 CDD:224117 218/697 (31%)
HR1_ROCK2 492..558 CDD:212028 15/65 (23%)
Rho_Binding 966..1032 CDD:286056 26/68 (38%)
PH_ROCK 1138..1242 CDD:269948 55/123 (45%)
C1 1246..1292 CDD:237996 29/45 (64%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 416 1.000 Domainoid score I653
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H21010
Inparanoid 1 1.050 1059 1.000 Inparanoid score I254
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D36370at33208
OrthoFinder 1 1.000 - - FOG0001986
OrthoInspector 1 1.000 - - otm49226
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1475
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
77.060

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