DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Gk1 and Shpk

DIOPT Version :9

Sequence 1:NP_524655.1 Gene:Gk1 / 43913 FlyBaseID:FBgn0025592 Length:538 Species:Drosophila melanogaster
Sequence 2:NP_083307.1 Gene:Shpk / 74637 MGIID:1921887 Length:476 Species:Mus musculus


Alignment Length:535 Identity:106/535 - (19%)
Similarity:185/535 - (34%) Gaps:154/535 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 SGPFVGAIDEGTTSARFIIFRAGTDEIVCF---------HQIEVESIFQKEGWCEQDPMAIVNTV 71
            |.|....||.||||.:..:..|.......|         .:.|.||........|||...|:..:
Mouse     3 SRPVTLGIDLGTTSVKAALLEAAPSLPSGFVVLASCARAARAETESAVAGPQGREQDVTRIIQAL 67

  Fly    72 NECITGACKKLVAVGGKVEEIITIGITNQRESTVVWDRNSG--------------QPLVNAIIWL 122
            |||:....::      :::.:..||::.|....:.|....|              :.:.:.:.|.
Mouse    68 NECLDALPRQ------QLQRVRGIGVSGQMHGILFWKAGQGCEWMEGGPAFVFEPRAVSHLVTWQ 126

  Fly   123 DNRTTSTVEELLETIPNNARNINYLRPLCGLPLSPYFSGVKLRWLRDNVPVVSQAMEKGTAMFGT 187
            |.|..|:   .|.::|         :|...|.::..|....:.||..|.|...::.:..    ||
Mouse   127 DGRCNSS---FLASLP---------KPDSHLSVATGFGCATIFWLLKNSPEFLKSYDAA----GT 175

  Fly   188 IDTWLMYNLTGGKDCGVHKTDVT--NASRTMLMNIETLQWDANLLKFFGLPKTILPEICSSSEFY 250
            |..:::..|     ||:.:..::  ||:.....|.::..|:.:.|:..|.|..:||:|.......
Mouse   176 IQDYVVAML-----CGLPRPLMSDQNAASWGYFNTQSQSWNLDTLEKAGFPIHLLPDIAEPGSMA 235

  Fly   251 G-------SIAQGVLQGIGITSVLGDQQAALVGQQCLAKGQAKATYGTGCFLLYNTGPSIVHSTH 308
            |       .|.:|...||    .|||.||::  ..|:  ||.     |...|..:|...:..|  
Mouse   236 GRTSHTWFEIPKGTQVGI----ALGDLQASV--YSCM--GQR-----TDAVLNISTSVQLAAS-- 285

  Fly   309 GLLTTVGYQLGRKAVPFYALEGSVSIA------------GAAFN--------------WLRD-NM 346
               ..||:|      |....:.:..:|            .|:.|              |:.| .:
Mouse   286 ---MPVGFQ------PLQTPDPAAPVAFFPYFDRTYLGVAASLNGGNVLATFVHMLVQWMADLGL 341

  Fly   347 NLIQN---SGQIETMASTVDNSLDVYFVPAFNG-LYAPYWNQDARGVICGLSEETTS-EHIVRAT 406
            .:.::   |..|:..|...|..|.:  .|...| .:.|    |....:..:|....| .|:.|  
Mouse   342 EVEESTVYSRMIQAAAQQKDTHLTI--TPTVLGERHLP----DQLASVTRISSSDLSLGHVTR-- 398

  Fly   407 LEAVCFQVRDILDSMHKDCKIPLAKLMVDGGMTVNNLFLQLQSDLVGIQVLRAKIAETTALGAAM 471
              |:|   |.|:.::|.  .:|..:|...|                        :|.....|:|:
Mouse   399 --ALC---RGIVQNLHS--MLPFQQLKEWG------------------------VARVVGSGSAL 432

  Fly   472 AAYKAVENRYQMEAP 486
            :..:.::...|...|
Mouse   433 SRNEVLKQEVQRAFP 447

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gk1NP_524655.1 glycerol_kin 18..522 CDD:273549 105/533 (20%)
FGGY_GK1-3_metazoa 18..522 CDD:212664 105/533 (20%)
ShpkNP_083307.1 FGGY_SHK_like 5..466 CDD:212661 105/533 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0554
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.