DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gk1 and katna1

DIOPT Version :10

Sequence 1:NP_524655.1 Gene:Gk1 / 43913 FlyBaseID:FBgn0025592 Length:538 Species:Drosophila melanogaster
Sequence 2:NP_001018440.1 Gene:katna1 / 553631 ZFINID:ZDB-GENE-050522-514 Length:485 Species:Danio rerio


Alignment Length:147 Identity:34/147 - (23%)
Similarity:59/147 - (40%) Gaps:31/147 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   392 GLSEETTSEHIVRATLEAVCFQVRDILDSMHKDCK------IPLAKLMVDGGMTVNNLFLQLQSD 450
            |.||...|:.::  .|.|..|. .||.:::.:..:      :|.||..|| .:.:|...|.|.:|
Zfish   337 GTSENDPSKMVM--VLAATNFP-WDIDEALRRRLEKRIYIPLPSAKGRVD-LLKINLKELDLAND 397

  Fly   451 LVGIQVLR-------AKIAETTALGAAMAAYKAVEN----------RYQMEAPLSKSGPREAIK- 497
            :...::..       |.|.......:.||..:.:|.          :.:|..|.:......|:| 
Zfish   398 VNMDKIAEQMEGYSGADITNVCRDASLMAMRRRIEGLTPEEIRNLPKDEMHMPTTMEDFETALKK 462

  Fly   498 --PSISATDRNLRYQKW 512
              .|:||.|.. :|:||
Zfish   463 VSKSVSAADLE-KYEKW 478

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gk1NP_524655.1 ASKHA_NBD_FGGY_GK1-3-like 18..519 CDD:466802 34/147 (23%)
katna1NP_001018440.1 Kp60-NTD 5..72 CDD:439297
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 101..173
RecA-like_KTNA1 205..373 CDD:410930 9/38 (24%)
AAA_lid_3 397..441 CDD:465537 6/43 (14%)
Vps4_C <441..483 CDD:462762 11/39 (28%)
Blue background indicates that the domain is not in the aligned region.

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