DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gk1 and psmc5

DIOPT Version :9

Sequence 1:NP_524655.1 Gene:Gk1 / 43913 FlyBaseID:FBgn0025592 Length:538 Species:Drosophila melanogaster
Sequence 2:NP_001003740.1 Gene:psmc5 / 445285 ZFINID:ZDB-GENE-030131-6547 Length:406 Species:Danio rerio


Alignment Length:464 Identity:89/464 - (19%)
Similarity:152/464 - (32%) Gaps:161/464 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   128 STVEELLETIPNNARNINYLRPLCGLPLSPYFSGVKLRWLRDNVPV----------VSQAMEKGT 182
            |.:|||..|:...::|:..|:      ........|:|.||:.:.:          |.:||:|..
Zfish    26 SKIEELQLTVNEKSQNLRRLQ------AQRNELNAKVRLLREELQLLQEQGSYVGEVVRAMDKKK 84

  Fly   183 AMFG-------TIDTWLMYNLTGGKDCGVHKTDVTNASRTMLMNIETLQWDANLLKFFGLPKTIL 240
            .:..       .:|.          |..:...|||...|..|.|      |:..|... ||..:.
Zfish    85 VLVKVHPEGKFVVDV----------DKNIDINDVTPNCRVALRN------DSYTLHKI-LPNKVD 132

  Fly   241 PEIC---------SSSEFYGSIAQGV----------------LQGIGITSVLGDQQAALV----- 275
            |.:.         |:.|..|.:.:.:                .:.:||....|    .|:     
Zfish   133 PLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKG----VLLYGPPG 193

  Fly   276 -GQQCLAKGQAKATYGTGCFLLYNTGPSIVHSTHGLLTTVGYQLGRKAVPFYALEGSVSIAGAAF 339
             |:..||:..|   :.|.|..:..:|..:|....|    .|.::.|:.. ..|.|.:.||.    
Zfish   194 TGKTLLARAVA---HHTDCTFIRVSGSELVQKFIG----EGARMVRELF-VMAREHAPSII---- 246

  Fly   340 NWLRDNMNLIQNS-------GQIETMASTVD--NSLDVYFVPAFNGLYAPYWNQDARGVICGLSE 395
              ..|.::.|.:|       |..|...:.::  |.||.:                         |
Zfish   247 --FMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGF-------------------------E 284

  Fly   396 ETTSEHIVRATLEAVCFQVRDILDSM-----HKDCKIPLAKLMVDGGMTVNNLFLQLQSDLVGIQ 455
            .|.:..::.||...      |||||.     ..|.||.......:..:.:..:..:..:...||.
Zfish   285 ATKNIKVIMATNRI------DILDSALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGIN 343

  Fly   456 VLRAKIAETTALGAAMAAYKAV----------ENRYQM-----EAPLSKSGPREAIKPSISATDR 505
            :  .||||... ||:.|..|.|          |.|..:     |..::|...::        :::
Zfish   344 L--RKIAELMP-GASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVAKVMQKD--------SEK 397

  Fly   506 NLRYQK-WK 513
            |:..:| ||
Zfish   398 NMSIKKLWK 406

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gk1NP_524655.1 glycerol_kin 18..522 CDD:273549 89/464 (19%)
FGGY_GK1-3_metazoa 18..522 CDD:212664 89/464 (19%)
psmc5NP_001003740.1 RPT1 4..404 CDD:224143 86/460 (19%)
AAA_16 153..>206 CDD:289934 8/59 (14%)
AAA 186..318 CDD:278434 36/176 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0554
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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