DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Gk1 and Rpt2

DIOPT Version :9

Sequence 1:NP_524655.1 Gene:Gk1 / 43913 FlyBaseID:FBgn0025592 Length:538 Species:Drosophila melanogaster
Sequence 2:NP_001287493.1 Gene:Rpt2 / 42828 FlyBaseID:FBgn0015282 Length:439 Species:Drosophila melanogaster


Alignment Length:61 Identity:15/61 - (24%)
Similarity:24/61 - (39%) Gaps:23/61 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    89 VEEIITIGITNQRESTVVWDRNSG---------QPLVNAIIWLDNR-------TTSTVEEL 133
            ::||..:|       |..:|.|||         ..|:|.:...|:|       .|:.:|.|
  Fly   283 IDEIDAVG-------TKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETL 336

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gk1NP_524655.1 glycerol_kin 18..522 CDD:273549 15/61 (25%)
FGGY_GK1-3_metazoa 18..522 CDD:212664 15/61 (25%)
Rpt2NP_001287493.1 PTZ00361 1..439 CDD:185575 15/61 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0554
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.900

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