DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Gk1 and CG3534

DIOPT Version :9

Sequence 1:NP_524655.1 Gene:Gk1 / 43913 FlyBaseID:FBgn0025592 Length:538 Species:Drosophila melanogaster
Sequence 2:NP_650582.1 Gene:CG3534 / 42047 FlyBaseID:FBgn0038463 Length:552 Species:Drosophila melanogaster


Alignment Length:548 Identity:109/548 - (19%)
Similarity:195/548 - (35%) Gaps:125/548 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 PPPTLSGPFVGAIDEGTTSARFIIFRAGTDEIVCFHQIEVES---IFQKEGWCEQ---------D 63
            ||..|...|:| .|..|...:.::..:.. |:|...:::.::   .|:..|....         .
  Fly     3 PPKQLKRTFLG-FDLSTQKLKAVLLGSSL-EVVAAAEVKFDTDLPEFRTTGGANAGSIKNEYFVQ 65

  Fly    64 PMAIVNTVNECITGACKKLVAVGGKVEEIITIGITNQRESTVVWDRNSGQPLVN----------- 117
            |:..|..::..:    .:||.....:..:..|..:.|:..::.|.::....|.|           
  Fly    66 PVMWVKAMDIVL----DRLVMQQADLSTVAAISGSGQQHGSLYWSKHGINTLQNLDSEKFLHAQI 126

  Fly   118 ---------AIIWLDNRTTSTVEELLETIPNNARNINYLRPLCGLPLSPYFSGVKLRWLRDNVPV 173
                     ..||:|..||....|:...:......:.    |.|......|:|.::|      .:
  Fly   127 DDSAFVVNRTPIWMDATTTKQCLEMEMAVGGKLNMVE----LTGSKCYERFTGPQIR------KI 181

  Fly   174 VSQ---AMEKGTAMFGTIDTWLMYNLTGGKDCGVHKTDVTNASRTMLMNIETLQWDANLLKFFG- 234
            ..|   |.|:...: ..:.:::.....|    .|...|.::.|...|::|....|....|.... 
  Fly   182 YQQRCHAYEEANRI-SLVSSFISSLFLG----SVAPIDFSDGSGMNLLDIRKKNWSKECLNVCAP 241

  Fly   235 -LPKTI-LPEICSSSEFYGSIAQGVLQGIG------ITSVLGDQQAALVGQQCLAKGQAKATYGT 291
             |.|.: :|  .|.:...|:::...::...      :.:..||..:||.|   :..|.:..|...
  Fly   242 DLDKRLDIP--VSPNSILGNVSPYFVERFSFSPDCKVAASTGDNPSALSG---MLVGSSWLTISM 301

  Fly   292 GCF----------LLYNTGPSIVHSTH-----GLLTTVGYQLGRKAVPFYALEGSVSIAGAAFNW 341
            |..          |.:..|..:.|.|.     |||......|.|:       |.:....|.  :|
  Fly   302 GTSDTLMMSLKEPLNWEEGHILCHPTETEEFMGLLCFRNASLVRE-------EMNKKTTGG--DW 357

  Fly   342 LRDNMNLIQNS---GQIETMASTVDNSLDVYFVPAFNGLYAPYWNQD--------ARGVICGLSE 395
              |..|...:|   |....||...:   |:..:|...|:..  ||::        |||||     
  Fly   358 --DKFNEYLDSTPRGNFGNMAVHFN---DMEIIPKAQGILR--WNREMDPSSPDAARGVI----- 410

  Fly   396 ETTSEHI-VRATLEAVCFQVRDILDSMHKDCKI-PLAKLMVDGGMTVNNLFLQLQSDLVGIQV-L 457
            :.:|..| :||.:|......|.:.:.:  ..|. |..:::|.||.:||...||..:|:....| :
  Fly   411 KFSSPQIEIRALVEGQMLHHRAVAEDL--GYKFGPETQILVTGGASVNKSILQTIADVFNAPVHI 473

  Fly   458 RAKIAETTALGAAMAAYKAVENRYQMEA 485
            :.:..|...||   |||::....|..||
  Fly   474 QDEGFEAALLG---AAYRSAYALYLQEA 498

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gk1NP_524655.1 glycerol_kin 18..522 CDD:273549 106/541 (20%)
FGGY_GK1-3_metazoa 18..522 CDD:212664 106/541 (20%)
CG3534NP_650582.1 FGGY_D-XK_euk 10..491 CDD:212660 103/532 (19%)
PLN02669 11..546 CDD:178274 106/540 (20%)
NBD_sugar-kinase_HSP70_actin <447..545 CDD:302596 18/55 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45443076
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR10196
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

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