DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gk1 and Atad2b

DIOPT Version :9

Sequence 1:NP_524655.1 Gene:Gk1 / 43913 FlyBaseID:FBgn0025592 Length:538 Species:Drosophila melanogaster
Sequence 2:NP_001349278.1 Gene:Atad2b / 320817 MGIID:2444798 Length:1457 Species:Mus musculus


Alignment Length:446 Identity:85/446 - (19%)
Similarity:147/446 - (32%) Gaps:156/446 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   126 TTSTVEELLETIPNNARNINYLRPLCGLPLS----PYFSGVKLRWLRDNVPVVSQAMEKGTAMFG 186
            |||:.||..|.  ..::::...|..| ||::    ...||:    ||:.|.|.:...:....   
Mouse   336 TTSSDEERFER--RKSKSMARARNRC-LPMNFRAEDLASGI----LRERVKVGASLADVDPM--- 390

  Fly   187 TIDTWLMYNLTGGKDCGVHKTDVTNASRTMLMNIETLQWDANLLKFFGLPKTILPEICSSSE--- 248
            .||..:.::..||....:|      |.:.|::              |.|   :.|||....:   
Mouse   391 NIDKSVRFDSIGGLSHHIH------ALKEMVV--------------FPL---LYPEIFEKFKIQP 432

  Fly   249 -----FYGSIAQG---VLQGIGITSVLGDQQAALV---GQQCLAK--GQAKATYGTGCFLLYNTG 300
                 |||....|   |.:.:......||::.|..   |..||:|  |:::..........|...
Mouse   433 PRGCLFYGPPGTGKTLVARALANECSQGDKKVAFFMRKGADCLSKWVGESERQLRLLFDQAYLMR 497

  Fly   301 PSIVHSTHGLLTTVGYQLGRKAVPFYALEGSVSIAGAAFNWLRDN--------MNLIQNSGQIET 357
            |||:.                   |..::|...:..:..:.:..:        |:.:.|.|:|..
Mouse   498 PSIIF-------------------FDEIDGLAPVRSSRQDQIHSSIVSTLLALMDGLDNRGEIVV 543

  Fly   358 MASTVDNSLDVYFVPAFNGLYAPYWNQDARGVICGLSEETTSEHIVR------------------ 404
            :.:|  |.|| ...||   |..|  .:..|..:..|.::...:||::                  
Mouse   544 IGAT--NRLD-SIDPA---LRRP--GRFDREFLFNLPDQRARKHILQIHTRDWNPKLSDAFLGEL 600

  Fly   405 ---------ATLEAVCFQVR---------DILDSMHKDCKIPLAKLMVDGGMTVNNLFLQLQSDL 451
                     |.::|:|.:..         .|..|.||                       ||.|:
Mouse   601 AEKCVGYCGADIKALCTEAALTALRRRYPQIYASSHK-----------------------LQLDV 642

  Fly   452 VGIQVLRAKIAETTALGAAMAAYKAVENRYQMEAPLSKSGPREAIKPSISATDRNL 507
            ..| ||.|............|:.:||.:..|..:|:        |:|.:..:..|:
Mouse   643 TSI-VLSAHDFYHAMQNIVPASQRAVMSSGQALSPI--------IRPLLERSFNNI 689

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gk1NP_524655.1 glycerol_kin 18..522 CDD:273549 85/446 (19%)
FGGY_GK1-3_metazoa 18..522 CDD:212664 85/446 (19%)
Atad2bNP_001349278.1 TIP49 <396..>668 CDD:332389 61/345 (18%)
Bromo_AAA 959..1070 CDD:99957
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0554
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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