DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Gk1 and Fggy

DIOPT Version :10

Sequence 1:NP_524655.1 Gene:Gk1 / 43913 FlyBaseID:FBgn0025592 Length:538 Species:Drosophila melanogaster
Sequence 2:NP_001013954.2 Gene:Fggy / 298250 RGDID:1359429 Length:552 Species:Rattus norvegicus


Alignment Length:574 Identity:129/574 - (22%)
Similarity:222/574 - (38%) Gaps:156/574 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 FVGAIDEGTTSAR-FIIFRAGTDEIVCFHQIEVESIFQKEGWCEQDPMAIVNTVNECITGACKKL 82
            :|| ||.||.|.| .::.:.|.  ::.|.:..::....:....||.        :|.|..||.::
  Rat    13 YVG-IDVGTGSVRAALVDQRGV--LLAFAEQPIKKWEPQFNHHEQS--------SEDIWAACCRV 66

  Fly    83 VAVGGKVEEIITIGITNQRE---------STVVWDR--------NSGQPLVNAIIWLDNRTTSTV 130
                  .:||:. ||...|.         |.||.|:        ..|....|.|:|||:|..|.|
  Rat    67 ------TKEIVQ-GIDAHRIRGLGFDATCSLVVLDKEFHPLPVNREGDSSRNIIMWLDHRAVSQV 124

  Fly   131 EELLETIPNNARNINYLRPLCGLPLSPYFSGVKLRWLRDNVPVVSQAMEKGTAMFGTIDTWLMYN 195
            ..:.||   ....:.|:    |..:|......||.||::|:..:  ..:|....|...| :|.:.
  Rat   125 HRINET---KHSVLQYV----GGVMSVEMQAPKLLWLKENLREI--CWDKAGHFFDLPD-FLSWK 179

  Fly   196 LTGGKDCGVHKTDVTNASRTMLMNIETLQ----WDANLLKFFGLP-----------KTILPEICS 245
            .||          ||..|...|:...|..    ||.:..|..||.           ..:||...|
  Rat   180 ATG----------VTARSLCSLVCKWTYSAEKGWDDSFWKMIGLEDLIGDNYNKIGNLVLPPGAS 234

  Fly   246 SSEFYGSIAQ-----GVLQGIGITSVLGDQQAA--------LVGQQCLAKGQAKAT-----YGT- 291
            ...  |.|.:     |:..||.:.:.|.|..|.        :.|.....:||...:     .|| 
  Rat   235 LGS--GLIPEAARELGLPSGIAVAASLIDAHAGGLGVIGADVRGHGLTCEGQPVTSRLAVICGTS 297

  Fly   292 GCFLLYNTGPSIVHSTHGLLTTVGYQLGRKAVP-FYALEGSVSIAG------------------- 336
            .|.:..:..|..|....|...:.       .|| |:..||..|:.|                   
  Rat   298 SCHMGISKDPIFVPGVWGPYFSA-------MVPGFWLNEGGQSVTGKLIDHMVQSHPAFPELQAK 355

  Fly   337 ------AAFNWLRDNMNLIQNSGQIETMASTVDNSLDVYFVPAFNGLYAPYWNQDARGVICGLSE 395
                  :.:.:|..:::||:.:..:..:      ::|::..|.|:|..:|..:...:|::.||:.
  Rat   356 ATARCQSIYAYLNSHLDLIKKAQPVGFL------TVDLHVWPDFHGNRSPLADLTLKGMVTGLTL 414

  Fly   396 ETTSEHIV---RATLEAVCFQVRDILDSM----HKDCKIPLAKLMVDGGMTVNNLFLQLQSDLVG 453
            ....:.:.   .||::|:.|..|.|:::|    |.     |:.|.:.||::.|.||:|:.:|:.|
  Rat   415 SRDLDDLAVLYLATIQAIAFGTRFIIETMEAAGHS-----LSTLFLCGGLSKNPLFVQMHADITG 474

  Fly   454 IQVLRAKIAETTALGAAMAA------YKAVENRYQMEAPLSKSG----PREAIK 497
            :.|:.::..|:..:|||:..      :.:|:   :..|.:||.|    |..|.|
  Rat   475 MPVVLSQEVESVLVGAAILGACASGDFASVQ---EAMARMSKVGKVVFPERADK 525

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gk1NP_524655.1 ASKHA_NBD_FGGY_GK1-3-like 18..519 CDD:466802 129/574 (22%)
FggyNP_001013954.2 ASKHA_NBD_FGGY_D-RBK 12..545 CDD:466800 129/574 (22%)

Return to query results.
Submit another query.