DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gk1 and shpk-1

DIOPT Version :9

Sequence 1:NP_524655.1 Gene:Gk1 / 43913 FlyBaseID:FBgn0025592 Length:538 Species:Drosophila melanogaster
Sequence 2:NP_001366916.1 Gene:shpk-1 / 188886 WormBaseID:WBGene00012017 Length:430 Species:Caenorhabditis elegans


Alignment Length:483 Identity:111/483 - (22%)
Similarity:179/483 - (37%) Gaps:129/483 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 IDEGTTSARFIIFRAGTDEIVCFHQIEVESIFQKEGWCEQDPMAIVNTVNECITGACKKLVAVGG 87
            ||.|||||: |..|.|.:.|:.|.:|.........|.  |:|..|:.||.:.:......|.:...
 Worm     9 IDIGTTSAK-ICARNGENVILEFKKIYEGDNSDAAGL--QNPKIIIQTVLDLLERTKSNLESRNL 70

  Fly    88 KVEEIITIGITNQRESTVVWDRNSGQ---------PLVNAIIWLDNRTTSTVE--ELLETIPNNA 141
            |:..|.|.|   |....|:|.:...:         ||.|   |    |.|:.|  ..|:|||   
 Worm    71 KISNIWTCG---QMHGIVMWKQRQNEIDLETLTISPLYN---W----TYSSTELPAFLKTIP--- 122

  Fly   142 RNINYLRPLCGLPLSPYFSGVKLRWLR-DNVPVVSQAMEKGTAMFGTIDTWLMYNLTGGKD---- 201
                  :..|| .|.|.|..|.|.:|. .|...::..:..||.|    |.::.. ||...|    
 Worm   123 ------KWECG-DLHPGFGLVTLAFLNYSNPEFLTNFIHCGTIM----DLFISI-LTQNPDPLIS 175

  Fly   202 -CGVHKTDVTNASRTMLMNIETLQWDANLLKFFGLPKTI-LPEICSSSEFYGSIAQGVLQGIGIT 264
             ...|.......:.|         |.:.:|.|  ||||: ||:|.||||     ..|...|....
 Worm   176 HHNAHSWGYCTENAT---------WQSEILDF--LPKTLKLPDINSSSE-----VSGTWHGAKCH 224

  Fly   265 SVLGDQQAALVGQQCLAKGQAKATYGTG---CFLLYNT--GPSIVHSTHGLLTTVGYQLGRKAVP 324
            ...||.||: |......:..|....||.   |.|:..:  ..:::.:|   :..:.:...:..|.
 Worm   225 VASGDLQAS-VASLDYYENTAYVILGTSAQLCCLIQTSEKNATVIPAT---VVRLPFSTSKTLVA 285

  Fly   325 FYALEGSVSIAGAAFNWLRDNMNLIQNSGQIETMASTVDNS---------LDVYFVPAFNGLYAP 380
            ..|:.|..::...    |:.|...:.:|.:::.:.:.:|.|         :|..|:|        
 Worm   286 ACAMNGGNALEAT----LKMNSPEVYSSNRLQELLNQLDKSAPAMPPNLRIDPIFIP-------- 338

  Fly   381 YWNQDARGVICGLSEETTSEHIVRATLEAVCFQVRDILDSMHKDCKIPLAKLMVDGGMTVNNLFL 445
                 .||.....|...||:..::            :|::.|:.              .:.||| 
 Worm   339 -----ERGSSKTFSISGTSDDPLQ------------LLEATHQG--------------IIRNLF- 371

  Fly   446 QLQSDLVGIQVLRA-KIAETTALGAAMA 472
                :|..|.:|:: ||.....:|:|.:
 Worm   372 ----ELFPIPLLKSLKIRRVALVGSAQS 395

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gk1NP_524655.1 glycerol_kin 18..522 CDD:273549 111/483 (23%)
FGGY_GK1-3_metazoa 18..522 CDD:212664 111/483 (23%)
shpk-1NP_001366916.1 FGGY_SHK_like 4..430 CDD:212661 111/483 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0554
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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