DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gk1 and rpt-1

DIOPT Version :10

Sequence 1:NP_524655.1 Gene:Gk1 / 43913 FlyBaseID:FBgn0025592 Length:538 Species:Drosophila melanogaster
Sequence 2:NP_506005.1 Gene:rpt-1 / 179641 WormBaseID:WBGene00004501 Length:435 Species:Caenorhabditis elegans


Alignment Length:210 Identity:41/210 - (19%)
Similarity:69/210 - (32%) Gaps:82/210 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 FVGAIDEGTTSARFIIFRAGTDEIVCFHQIEVESIFQKEGWCEQDPMAIVNTVNECITGACKKLV 83
            |...|| ....|||...:.|.:|:   .:..:|.|.|.:|:   ||           .|..|.|:
 Worm   275 FFDEID-AVGGARFDDGQGGDNEV---QRTMLELINQLDGF---DP-----------RGNIKVLM 321

  Fly    84 AVGGKVEEIITIGITNQRESTVVWDRNSGQPLVNAIIWLDNRTTSTVEELLETIPNNA------- 141
            |             ||:.::            ::..:....|....||..|..:...|       
 Worm   322 A-------------TNRPDT------------LDPALMRPGRLDRKVEFALPDLAGRAHILKIHA 361

  Fly   142 ------RNINY--LRPLCGLPLSPYFSGVKLRWL------------------RDNVPVVSQAMEK 180
                  |:|.|  |..||     |..:|.::|.:                  :|.:..:::.: |
 Worm   362 KQMSVERDIRYDLLARLC-----PNSTGAEIRSVCTEAGMFAIRARRKVATEKDFLEAINKVV-K 420

  Fly   181 GTAMFGTIDTWLMYN 195
            |.|.|.....:|.:|
 Worm   421 GYAKFSATPRYLTHN 435

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gk1NP_524655.1 ASKHA_NBD_FGGY_GK1-3-like 18..519 CDD:466802 41/210 (20%)
rpt-1NP_506005.1 PRK03992 117..420 CDD:179699 35/193 (18%)

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