DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Gk1 and Gykl1

DIOPT Version :9

Sequence 1:NP_524655.1 Gene:Gk1 / 43913 FlyBaseID:FBgn0025592 Length:538 Species:Drosophila melanogaster
Sequence 2:NP_034423.2 Gene:Gykl1 / 14625 MGIID:891990 Length:549 Species:Mus musculus


Alignment Length:521 Identity:278/521 - (53%)
Similarity:365/521 - (70%) Gaps:6/521 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 PPTLSGPFVGAIDEGTTSARFIIFRAGTDEIVCFHQIEVESIFQKEGWCEQDPMAIVNTVNECIT 76
            |..:.||.|||:|:||:|.||::|...|.|::|.||:|:...|.||||.||||.||:.:|.|||.
Mouse     5 PKAVLGPLVGAVDQGTSSTRFLVFNPQTAELLCHHQVEIAQEFPKEGWVEQDPKAILQSVYECIE 69

  Fly    77 GACKKLVAVGGKVEEIITIGITNQRESTVVWDRNSGQPLVNAIIWLDNRTTSTVEELLETIPNNA 141
            .||:||......:..|..||:|||||:|:|||:.:|:||.||::|||.||.||||.|.::|  :.
Mouse    70 KACEKLGQQSIDISNIKAIGVTNQRETTIVWDKFTGEPLYNAVVWLDLRTQSTVENLSKSI--SV 132

  Fly   142 RNINYLRPLCGLPLSPYFSGVKLRWLRDNVPVVSQAMEKGTAMFGTIDTWLMYNLTGGKDCGVHK 206
            .| |:::...|||:|.|||.|||.||.:||..|.:|:|.|.|:|||:|:||::.:|||.:.|||.
Mouse   133 SN-NFVKNKTGLPISTYFSAVKLHWLIENVRKVQKAIEDGRAIFGTVDSWLIWCMTGGINGGVHC 196

  Fly   207 TDVTNASRTMLMNIETLQWDANLLKFFGLPKTILPEICSSSEFYGSIAQGVLQGIGITSVLGDQQ 271
            |||:|||||||.||.:||||..|..|||:|.||||.|.||||.||.:..|||:|:.|:..||||.
Mouse   197 TDVSNASRTMLFNIHSLQWDEELCDFFGIPMTILPRIRSSSEIYGLVKSGVLEGVPISGCLGDQS 261

  Fly   272 AALVGQQCLAKGQAKATYGTGCFLLYNTGPSIVHSTHGLLTTVGYQLGRKAVPFYALEGSVSIAG 336
            ||||||.||..||||:|||||||||.|||...|:|.|||||||.|||||:...:|||||||:|||
Mouse   262 AALVGQLCLQDGQAKSTYGTGCFLLCNTGQKCVNSEHGLLTTVAYQLGRQEPVYYALEGSVAIAG 326

  Fly   337 AAFNWLRDNMNLIQNSGQIETMASTVDNSLDVYFVPAFNGLYAPYWNQDARGVICGLSEETTSEH 401
            |..:|:::|:.:||:|.:||.:|.....|...||||||:|||||||:..|||:||||::.|...|
Mouse   327 AVVSWIKNNLQIIQSSSEIEKLAEVAGTSYGCYFVPAFSGLYAPYWDPSARGIICGLTQFTNKFH 391

  Fly   402 IVRATLEAVCFQVRDILDSMHKDCKIPLAKLMVDGGMTVNNLFLQLQSDLVGIQVLRAKIAETTA 466
            |..|.|||||||.|:|||:|:.||.|||..|.||||||.|.:.:|||:|::.|.|::..:.||||
Mouse   392 IAFAALEAVCFQTREILDAMNSDCGIPLTHLQVDGGMTANRVLMQLQADILCIPVMKPFMPETTA 456

  Fly   467 LGAAMAAYKAVE--NRYQMEAPLSKSGPREAIKPSISATDRNLRYQKWKMAIDRSLNWETSTLPQ 529
            ||.|||| .|.|  :.:.::.....|...|..:|.|:..:...||..||.|:.:|:.|..:..|.
Mouse   457 LGVAMAA-GAAEGVSVWSLDPKDLSSVQMEKFEPQINVEESEGRYATWKKAVLKSMGWVLTQSPD 520

  Fly   530 G 530
            |
Mouse   521 G 521

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gk1NP_524655.1 glycerol_kin 18..522 CDD:273549 273/505 (54%)
FGGY_GK1-3_metazoa 18..522 CDD:212664 273/505 (54%)
Gykl1NP_034423.2 glycerol_kin 11..513 CDD:273549 273/505 (54%)
FGGY_GK1-3_metazoa 11..513 CDD:212664 273/505 (54%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167833651
Domainoid 1 1.000 292 1.000 Domainoid score I1512
eggNOG 1 0.900 - - E1_COG0554
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 566 1.000 Inparanoid score I1070
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG60628
OrthoDB 1 1.010 - - D352321at33208
OrthoFinder 1 1.000 - - FOG0001035
OrthoInspector 1 1.000 - - otm42844
orthoMCL 1 0.900 - - OOG6_100613
Panther 1 1.100 - - O PTHR10196
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1107
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1413.770

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