DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gk1 and Psmc1

DIOPT Version :10

Sequence 1:NP_524655.1 Gene:Gk1 / 43913 FlyBaseID:FBgn0025592 Length:538 Species:Drosophila melanogaster
Sequence 2:NP_476464.1 Gene:Psmc1 / 117263 RGDID:621097 Length:440 Species:Rattus norvegicus


Alignment Length:61 Identity:16/61 - (26%)
Similarity:24/61 - (39%) Gaps:23/61 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    89 VEEIITIGITNQRESTVVWDRNSG---------QPLVNAIIWLDNR-------TTSTVEEL 133
            ::||..||       |..:|.|||         ..|:|.:...|:|       .|:.:|.|
  Rat   284 IDEIDAIG-------TKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETL 337

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gk1NP_524655.1 ASKHA_NBD_FGGY_GK1-3-like 18..519 CDD:466802 16/61 (26%)
Psmc1NP_476464.1 PTZ00361 1..440 CDD:185575 16/61 (26%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..49
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 84..104
Blue background indicates that the domain is not in the aligned region.

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